Gene detail information of Glyur000017s00002379.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G75390.18.00E-39basic leucine-zipper 44
NRNP_001238344.16.66E-81bZIP transcription factor bZIP124 [Glycine max]
Swissprottr|P24068|OCS1_MAIZE3.00E-23Ocs element-binding factor 1
trEMBLtr|Q0GPF8|Q0GPF8_SOYBN2.00E-81Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G04440.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold000177427074743+


Gene family

Gene familysubfamily
Transcription Factors FamilybZIP


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003700  transcription factor activity, sequence-specific DNA binding

GO:0043565  sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000017s00002379.1PF00170.16bZIP_132903.70E-11


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control399.205
SRR1783600control399.187
SRR1783602moderate drought stress461.987
SRR1811619moderate drought stress489.360

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain788.335
DRR006520Root Summer glycyrrhizin high producing strain763.444
DRR006521Root Winter glycyrrhizin high producing strain246.104
DRR006522Root Winter glycyrrhizin high producing strain231.118
DRR006523Root Summer glycyrrhizin low producing strain634.234
DRR006524Root Summer glycyrrhizin low producing strain626.706
DRR006525Leaf Summer glycyrrhizin high producing strain127.713
DRR006526Leaf Summer glycyrrhizin high producing strain124.019

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)151.320
SRR2868004Drought Stress(Tissue:root)140.778
SRR2967015Control (Tissue:root)156.234

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave136.242
SRR9715740Leave227.553
SRR9715741Leave110.857
SRR9715739Root292.461
SRR9715742Root211.688
SRR9715743Root220.940

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h178.942
SRR8749028MeJA induced 9h144.363
SRR8749029MeJA induced 9h247.694
SRR8749030Uninduced194.017
SRR8749031Uninduced688.300
SRR8749032Uninduced679.823

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root166.706
SRR8400027Control-Root140.294

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved