Gene detail information of Glyur000017s00002391.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G16440.10Minichromosome maintenance (MCM2/3/5) family protein
NRXP_004507486.10PREDICTED: DNA replication licensing factor mcm4-B-like [Cicer arietinum]
COGYP_001737781.13.00E-131MCM family protein [Candidatus Korarchaeum cryptofilum OPF8]
Swissprottr|Q0WVF5|MCM4_ARATH0DNA replication licensing factor MCM4
trEMBLtr|B0LUQ7|B0LUQ7_PEA0Minichromosome maintenance 4 protein {ECO:0000313|EMBL:ABY81650.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00017148813154428-


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K02212MCM4, CDC54 EC:3.6.4.12 DNA replication map03030
Cell cyclemap04110
Cell cycle - yeastmap04111
Meiosis - yeastmap04113


Gene Ontology

biological_process

GO:0006260  DNA replication

GO:0006270  DNA replication initiation


cellular_component

GO:0042555  MCM complex


molecular_function

GO:0003677  DNA binding

GO:0003678  DNA helicase activity

GO:0005524  ATP binding

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000017s00002391.1PF14551.1MCM_N1222443.00E-18
Glyur000017s00002391.1PF00493.18MCM4147397.80E-135


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control12.631
SRR1783600control12.729
SRR1783602moderate drought stress5.622
SRR1811619moderate drought stress5.626

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain7.347
DRR006520Root Summer glycyrrhizin high producing strain7.228
DRR006521Root Winter glycyrrhizin high producing strain2.359
DRR006522Root Winter glycyrrhizin high producing strain2.493
DRR006523Root Summer glycyrrhizin low producing strain5.739
DRR006524Root Summer glycyrrhizin low producing strain5.616
DRR006525Leaf Summer glycyrrhizin high producing strain1.487
DRR006526Leaf Summer glycyrrhizin high producing strain1.444

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)26.867
SRR2868004Drought Stress(Tissue:root)12.702
SRR2967015Control (Tissue:root)12.421

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave7.165
SRR9715740Leave0.119
SRR9715741Leave1.098
SRR9715739Root3.177
SRR9715742Root5.884
SRR9715743Root4.921

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h92.512
SRR8749028MeJA induced 9h83.164
SRR8749029MeJA induced 9h64.729
SRR8749030Uninduced9.653
SRR8749031Uninduced23.518
SRR8749032Uninduced31.062

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root21.850
SRR8400027Control-Root18.076

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved