Gene detail information of Glyur000017s00002425.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G21330.10fructose-bisphosphate aldolase 1
NRXP_003540964.10PREDICTED: fructose-bisphosphate aldolase 1, chloroplastic-like [Glycine max]
COGYP_007169191.16.00E-97fructose-bisphosphate aldolase [Halothece sp. PCC 7418]
Swissprottr|Q944G9|ALFC2_ARATH0Probable fructose-bisphosphate aldolase 2, chloroplastic (Precursor)
trEMBLtr|I1LPX6|I1LPX6_SOYBN0Fructose-bisphosphate aldolase {ECO:0000256|RuleBase:RU003994}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00017324879330124+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01623ALDO EC:4.1.2.13 Carbon metabolism map01200
Biosynthesis of amino acidsmap01230
Glycolysis / Gluconeogenesismap00010
Pentose phosphate pathwaymap00030
Fructose and mannose metabolismmap00051
Carbon fixation in photosynthetic organismsmap00710
Methane metabolismmap00680


Gene Ontology

biological_process

GO:0006096  glycolytic process


molecular_function

GO:0003824  catalytic activity

GO:0004332  fructose-bisphosphate aldolase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000017s00002425.1PF00274.14Glycolytic1074356.00E-145


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.367
SRR1783600control1.458
SRR1783602moderate drought stress6.805
SRR1811619moderate drought stress6.911

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.517
DRR006520Root Summer glycyrrhizin high producing strain1.535
DRR006521Root Winter glycyrrhizin high producing strain1.073
DRR006522Root Winter glycyrrhizin high producing strain1.098
DRR006523Root Summer glycyrrhizin low producing strain3.678
DRR006524Root Summer glycyrrhizin low producing strain3.754
DRR006525Leaf Summer glycyrrhizin high producing strain2477.443
DRR006526Leaf Summer glycyrrhizin high producing strain2464.215

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)27.911
SRR2868004Drought Stress(Tissue:root)54.230
SRR2967015Control (Tissue:root)12.418

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2095.704
SRR9715740Leave3777.319
SRR9715741Leave1902.352
SRR9715739Root2.299
SRR9715742Root5.631
SRR9715743Root5.451

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.092
SRR8749028MeJA induced 9h0.000
SRR8749029MeJA induced 9h0.000
SRR8749030Uninduced0.038
SRR8749031Uninduced0.098
SRR8749032Uninduced0.051

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root13.680
SRR8400027Control-Root22.581

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved