Gene detail information of Glyur000017s00002441.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G16530.11.00E-973-oxo-5-alpha-steroid 4-dehydrogenase family protein
NRXP_003537828.20PREDICTED: polyprenol reductase 2-like [Glycine max]
Swissprottr|Q9SI62|POED2_ARATH3.00E-128Polyprenol reductase 2
trEMBLtr|I1LJ54|I1LJ54_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G11780.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00017441496444583-


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K12345SRD5A3 EC:1.3.1.22 1.3.1.94 Steroid hormone biosynthesis map00140


Gene Ontology

biological_process

GO:0006629  lipid metabolic process


cellular_component

GO:0005737  cytoplasm

GO:0016021  integral component of membrane


molecular_function

GO:0016627  oxidoreductase activity, acting on the CH-CH group of donors

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000017s00002441.1PF02544.11Steroid_dh2323455.40E-28


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control8.257
SRR1783600control8.321
SRR1783602moderate drought stress8.154
SRR1811619moderate drought stress8.566

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain7.310
DRR006520Root Summer glycyrrhizin high producing strain7.559
DRR006521Root Winter glycyrrhizin high producing strain7.388
DRR006522Root Winter glycyrrhizin high producing strain6.763
DRR006523Root Summer glycyrrhizin low producing strain8.340
DRR006524Root Summer glycyrrhizin low producing strain8.318
DRR006525Leaf Summer glycyrrhizin high producing strain4.433
DRR006526Leaf Summer glycyrrhizin high producing strain4.520

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)19.412
SRR2868004Drought Stress(Tissue:root)18.066
SRR2967015Control (Tissue:root)17.726

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave12.681
SRR9715740Leave11.780
SRR9715741Leave13.280
SRR9715739Root6.476
SRR9715742Root8.019
SRR9715743Root8.032

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h10.500
SRR8749028MeJA induced 9h11.496
SRR8749029MeJA induced 9h8.223
SRR8749030Uninduced6.640
SRR8749031Uninduced7.336
SRR8749032Uninduced6.162

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root19.781
SRR8400027Control-Root18.555

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved