Gene detail information of Glyur000017s00002445.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G16570.10GLN phosphoribosyl pyrophosphate amidotransferase 1
NRXP_003540945.10PREDICTED: amidophosphoribosyltransferase 1, chloroplastic-like [Glycine max]
COGYP_593695.10amidophosphoribosyltransferase [Candidatus Koribacter versatilis Ellin345]
Swissprottr|Q9SI61|ASE1_ARATH0Amidophosphoribosyltransferase 1, chloroplastic (Precursor)
trEMBLtr|I1LPW4|I1LPW4_SOYBN0Amidophosphoribosyltransferase {ECO:0000256|PIRNR:PIRNR000485}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00017461029462768-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00764purF, PPAT EC:2.4.2.14 Purine metabolism map00230
Alanine, aspartate and glutamate metabolismmap00250


Gene Ontology

biological_process

GO:0008152  metabolic process

GO:0009113  purine nucleobase biosynthetic process

GO:0009116  nucleoside metabolic process


molecular_function

GO:0004044  amidophosphoribosyltransferase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000017s00002445.1PF13537.1GATase_71572851.40E-25
Glyur000017s00002445.1PF00156.22Pribosyltran3444601.20E-14


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control27.991
SRR1783600control28.267
SRR1783602moderate drought stress23.527
SRR1811619moderate drought stress23.292

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain34.484
DRR006520Root Summer glycyrrhizin high producing strain33.644
DRR006521Root Winter glycyrrhizin high producing strain13.251
DRR006522Root Winter glycyrrhizin high producing strain12.996
DRR006523Root Summer glycyrrhizin low producing strain43.485
DRR006524Root Summer glycyrrhizin low producing strain43.472
DRR006525Leaf Summer glycyrrhizin high producing strain34.429
DRR006526Leaf Summer glycyrrhizin high producing strain34.304

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)29.486
SRR2868004Drought Stress(Tissue:root)27.678
SRR2967015Control (Tissue:root)29.626

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave53.676
SRR9715740Leave44.775
SRR9715741Leave44.918
SRR9715739Root65.144
SRR9715742Root71.176
SRR9715743Root69.130

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h55.323
SRR8749028MeJA induced 9h33.523
SRR8749029MeJA induced 9h25.602
SRR8749030Uninduced10.282
SRR8749031Uninduced1.391
SRR8749032Uninduced1.987

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root25.907
SRR8400027Control-Root27.416

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved