Gene detail information of Glyur000017s00002471.1 |
Functional Annotation
Database | Orthologs | E value | Annotation |
---|---|---|---|
TAIR | AT1G68000.1 | 2.00E-90 | phosphatidylinositol synthase 1 |
NR | XP_003607172.1 | 2.72E-137 | CDP-diacylglycerol-inositol 3-phosphatidyltransferase [Medicago truncatula] |
COG | YP_001958289.1 | 1.00E-31 | hypothetical protein Aasi_1236 [Candidatus Amoebophilus asiaticus 5a2] |
Swissprot | tr|Q8LBA6|PIS1_ARATH | 9.00E-114 | CDP-diacylglycerol--inositol 3-phosphatidyltransferase 1 |
trEMBL | tr|G7JMC6|G7JMC6_MEDTR | 1.00E-137 | CDP-diacylglycerol-inositol 3-phosphatidyltransferase {ECO:0000313|EMBL:AES89369.1} |
Sequence
Transcript Sequence |
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Protein Sequence |
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Location information(JBrowse)
Scaffold | Start | End | Strand |
---|---|---|---|
Scaffold00017 | 579038 | 582617 | - |
Gene family
Gene family | subfamily |
---|---|
-- | -- |
KEGG pathway
KO | Enzyme | Enzyme ID | pathway | mapID |
---|---|---|---|---|
K00999 | CDIPT | EC:2.7.8.11 | Inositol phosphate metabolism | map00562 |
Glycerophospholipid metabolism | map00564 | |||
Phosphatidylinositol signaling system | map04070 |
Gene Ontology
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Pfam domain
Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
---|---|---|---|---|---|
Glyur000017s00002471.1 | PF01066.16 | CDP-OH_P_transf | 16 | 103 | 4.20E-16 |
Expression pattern
SRA Experiment | Description | TPM |
---|---|---|
SRR1783599 | control | 11.324 |
SRR1783600 | control | 11.010 |
SRR1783602 | moderate drought stress | 9.091 |
SRR1811619 | moderate drought stress | 8.600 |
SRA Experiment | Description | TPM |
---|---|---|
DRR006519 | Root Summer glycyrrhizin high producing strain | 17.715 |
DRR006520 | Root Summer glycyrrhizin high producing strain | 17.074 |
DRR006521 | Root Winter glycyrrhizin high producing strain | 23.285 |
DRR006522 | Root Winter glycyrrhizin high producing strain | 22.127 |
DRR006523 | Root Summer glycyrrhizin low producing strain | 14.005 |
DRR006524 | Root Summer glycyrrhizin low producing strain | 14.989 |
DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.175 |
DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.363 |
SRA Experiment | Description | TPM |
---|---|---|
SRR2867873 | Salt Stress(Tissue:root) | 40.903 |
SRR2868004 | Drought Stress(Tissue:root) | 34.533 |
SRR2967015 | Control (Tissue:root) | 34.443 |
SRA Experiment | Description | TPM |
---|---|---|
SRR9715738 | Leave | 22.695 |
SRR9715740 | Leave | 25.624 |
SRR9715741 | Leave | 25.774 |
SRR9715739 | Root | 8.610 |
SRR9715742 | Root | 15.617 |
SRR9715743 | Root | 12.076 |
SRA Experiment | Description | TPM |
---|---|---|
SRR8749027 | MeJA induced 9h | 29.977 |
SRR8749028 | MeJA induced 9h | 20.843 |
SRR8749029 | MeJA induced 9h | 23.338 |
SRR8749030 | Uninduced | 16.671 |
SRR8749031 | Uninduced | 15.973 |
SRR8749032 | Uninduced | 15.601 |
SRA Experiment | Description | TPM |
---|---|---|
SRR8400026 | NaCl treatment-Root | 33.742 |
SRR8400027 | Control-Root | 32.363 |