Gene detail information of Glyur000018s00003727.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G78660.3 | 2.00E-113 | gamma-glutamyl hydrolase 1 |
| NR | XP_006593481.1 | 2.68E-173 | PREDICTED: gamma-glutamyl hydrolase isoform X1 [Glycine max] |
| Swissprot | tr|P93164|GGH_SOYBN | 2.00E-174 | Gamma-glutamyl hydrolase (Precursor) |
| trEMBL | tr|I1M2Y5|I1M2Y5_SOYBN | 2.00E-171 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G34290.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00018 | 298683 | 302023 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K01307 | GGH | EC:3.4.19.9 | Folate biosynthesis | map00790 |
| Antifolate resistance | map01523 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000018s00003727.1 | PF07722.8 | Peptidase_C26 | 89 | 305 | 7.80E-39 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 39.155 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 38.949 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.067 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.036 |
| SRR2967015 | Control (Tissue:root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 216.848 |
| SRR9715740 | Leave | 17.145 |
| SRR9715741 | Leave | 56.257 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.919 |
| SRR9715743 | Root | 1.126 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.003 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.149 |
| SRR8400027 | Control-Root | 1.129 |