Gene detail information of Glyur000018s00003729.1 |
Functional Annotation
Database | Orthologs | E value | Annotation |
---|---|---|---|
TAIR | AT3G56400.1 | 5.00E-25 | WRKY DNA-binding protein 70 |
NR | XP_007149557.1 | 1.88E-83 | hypothetical protein PHAVU_005G080200g [Phaseolus vulgaris] |
Swissprot | tr|Q9LY00|WRK70_ARATH | 3.00E-27 | Probable WRKY transcription factor 70 |
trEMBL | tr|V7BYA0|V7BYA0_PHAVU | 7.00E-84 | Uncharacterized protein {ECO:0000313|EMBL:ESW21551.1} |
Sequence
Transcript Sequence |
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Protein Sequence |
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Location information(JBrowse)
Scaffold | Start | End | Strand |
---|---|---|---|
Scaffold00018 | 309729 | 332144 | - |
Gene family
Gene family | subfamily |
---|---|
Transcription Factors Family | WRKY |
KEGG pathway
KO | Enzyme | Enzyme ID | pathway | mapID |
---|---|---|---|---|
-- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
---|---|---|---|---|---|
Glyur000018s00003729.1 | PF03106.10 | WRKY | 136 | 196 | 1.60E-21 |
Glyur000018s00003729.1 | PF03106.10 | WRKY | 398 | 458 | 1.50E-19 |
Glyur000018s00003729.1 | PF03106.10 | WRKY | 558 | 619 | 2.30E-15 |
Expression pattern
SRA Experiment | Description | TPM |
---|---|---|
SRR1783599 | control | 0.017 |
SRR1783600 | control | 0.017 |
SRR1783602 | moderate drought stress | 0.013 |
SRR1811619 | moderate drought stress | 0.028 |
SRA Experiment | Description | TPM |
---|---|---|
DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
DRR006522 | Root Winter glycyrrhizin high producing strain | 0.050 |
DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.330 |
DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.430 |
SRA Experiment | Description | TPM |
---|---|---|
SRR2867873 | Salt Stress(Tissue:root) | 0.234 |
SRR2868004 | Drought Stress(Tissue:root) | 0.231 |
SRR2967015 | Control (Tissue:root) | 0.121 |
SRA Experiment | Description | TPM |
---|---|---|
SRR9715738 | Leave | 1.098 |
SRR9715740 | Leave | 3.268 |
SRR9715741 | Leave | 4.791 |
SRR9715739 | Root | 0.119 |
SRR9715742 | Root | 0.099 |
SRR9715743 | Root | 0.083 |
SRA Experiment | Description | TPM |
---|---|---|
SRR8749027 | MeJA induced 9h | 1.956 |
SRR8749028 | MeJA induced 9h | 0.098 |
SRR8749029 | MeJA induced 9h | 2.536 |
SRR8749030 | Uninduced | 0.016 |
SRR8749031 | Uninduced | 0.649 |
SRR8749032 | Uninduced | 3.014 |
SRA Experiment | Description | TPM |
---|---|---|
SRR8400026 | NaCl treatment-Root | 0.548 |
SRR8400027 | Control-Root | 0.431 |