Gene detail information of Glyur000018s00003729.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G56400.15.00E-25WRKY DNA-binding protein 70
NRXP_007149557.11.88E-83hypothetical protein PHAVU_005G080200g [Phaseolus vulgaris]
Swissprottr|Q9LY00|WRK70_ARATH3.00E-27Probable WRKY transcription factor 70
trEMBLtr|V7BYA0|V7BYA0_PHAVU7.00E-84Uncharacterized protein {ECO:0000313|EMBL:ESW21551.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00018309729332144-


Gene family

Gene familysubfamily
Transcription Factors FamilyWRKY


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003700  transcription factor activity, sequence-specific DNA binding

GO:0043565  sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000018s00003729.1PF03106.10WRKY1361961.60E-21
Glyur000018s00003729.1PF03106.10WRKY3984581.50E-19
Glyur000018s00003729.1PF03106.10WRKY5586192.30E-15


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.017
SRR1783600control0.017
SRR1783602moderate drought stress0.013
SRR1811619moderate drought stress0.028

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.000
DRR006520Root Summer glycyrrhizin high producing strain0.000
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.050
DRR006523Root Summer glycyrrhizin low producing strain0.000
DRR006524Root Summer glycyrrhizin low producing strain0.000
DRR006525Leaf Summer glycyrrhizin high producing strain0.330
DRR006526Leaf Summer glycyrrhizin high producing strain0.430

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.234
SRR2868004Drought Stress(Tissue:root)0.231
SRR2967015Control (Tissue:root)0.121

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.098
SRR9715740Leave3.268
SRR9715741Leave4.791
SRR9715739Root0.119
SRR9715742Root0.099
SRR9715743Root0.083

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.956
SRR8749028MeJA induced 9h0.098
SRR8749029MeJA induced 9h2.536
SRR8749030Uninduced0.016
SRR8749031Uninduced0.649
SRR8749032Uninduced3.014

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.548
SRR8400027Control-Root0.431