Gene detail

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Gene detail information of Glyur000018s00003733.2

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G78700.1	2.00E-91	BES1/BZR1 homolog 4
NR	XP_004489001.1	6.72E-175	PREDICTED: BES1/BZR1 homolog protein 4-like isoform X1 [Cicer arietinum]
Swissprot	tr\|Q9ZV88\|BEH4_ARATH	5.00E-131	BES1/BZR1 homolog protein 4
trEMBL	tr\|V7BWX4\|V7BWX4_PHAVU	8.00E-167	Uncharacterized protein {ECO:0000313\|EMBL:ESW21543.1}

Sequence

Transcript Sequence

>Glyur000018s00003733.2
CCCTCCCTTTCACACCCTCTCTTTCTTCCCTCGGCATGCTTCTCTTCAAACACTCCCTAGCTTCGCGCACCAAAACCACCACCGGTTTCCCGACGAGTTTTCCGGCAAGCATCCTCCTCCGACCATTCTCCGGCTACCTCACCACTCACGCGCTTAGATCTGATCAGATCACCACCAACACCGATCGCAACCAGAACTCCTCCAAACGCCGTCGTCTCGTTCCGTTTCAAGCAAGCGATCTTAAGATTCTTAACCGCTTCTCGAGTCGAGCGTCGTTTTCACTCCGATTCGAAGCTCCGAAGAACCGNTCCGAGCTTCGCGACGGAAATGACGTCGTTTTGAGGCACTTTTCCTCCCGGTAATTCGCGGCGGTTCGATCTCGGAACTTCTCGATCGCATTTAATCGAAGTGCCTGATCCTTTTTTTCTCTCTCTACTTTCTTCGTTCTCTTTGAGTTTCTATTTTTTAACTTCGTCGGCGGAGAGTTTTTCCGGCGAGGACGATGACGTCGGGGACGAGGCAGCCAACGTGGAAGGAGAGAGAGAACAACAAGAGGAGAGAGAGGAGGAGAAGAGCCATAGCTGCGAAGATCTTCTCCGGACTGAGAATGTACGGAAACTACAAGCTCCCGAAGCACTGCGACAACAACGAAGTCCTCAAGGCTCTCTGTAACGAAGCCGGTTGGACCGTTGAACCAGACGGCACCACATATCGTAAGGGATGCAAACCTGTTGAACGAATGGACGTGGTTGGTGGTTCTGCAGTGGCAAGCCCATGTTCATCTTACCATCCAAGTCCCTGTGCTTCCTACAACCCAAGTCCATGCTCTTCTTCGTTCCCTAGCCCTCGCTCATCCTCCTATGCTGCAAATGCTAATGGTGATGGCAATTCCCTCATTCCATGGCTCAAAAATCTCTCATCTGGATCATCATCAGCATCCTCTTCCAAGCTTCCCCAGCTATATATTCATACTGGCTCCATCAGCGCTCCTGTCACTCCTCCACTTAGCTCTCCAACTGCCCGAACACCCCGACTCAAAGCCGACTGGGAGGATCCGTCCGCTCGTCCCGGGTGGGGTGGTGGGCAGCAGTACCCCTTCCAGCCCTCTTCCACCCCTCCAAGCCCTGGCCGCCAGGTTCTTGACCCAGGTTGGTTTGCTGGGATTAGGATTCCCCAGGGCGGGCCAAATTCTCCAACCTTCAGCCTGGTCTCTTCTAACCCATTTGGCTTCAAGGAAGAGGTTTTCAGTGCCAGTGGTTCCCGCATGTGGACACCTGGGCAAAGTGGGACATGTTCTCCAGCTGTAGCTGCAGGCTCTGATCATACTGCTGACATACCAATGGCTGAAGCGGTTTCAGACGAATTTGCCTTCGGAAGCAGCACCGCAGGTTTGGTGAAGCCCTGGGAAGGAGAGAGGATCCATGAAGATATCGGATCAGATGATTTAGAGCTCACTCTTGGGGGCTCAAAGACCAGTTCCCCGGCATAG

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00018	377084	394344	+

Gene family

Gene family	subfamily
Transcription Factors Family	BES1
EAR motif-containing Proteins	BES1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000018s00003733.2	PF05687.8	DUF822	2	145	6.00E-64

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	73.654
SRR1783600	control	71.284
SRR1783602	moderate drought stress	65.490
SRR1811619	moderate drought stress	60.018

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	63.091
DRR006520	Root Summer glycyrrhizin high producing strain	62.232
DRR006521	Root Winter glycyrrhizin high producing strain	9.680
DRR006522	Root Winter glycyrrhizin high producing strain	9.254
DRR006523	Root Summer glycyrrhizin low producing strain	63.885
DRR006524	Root Summer glycyrrhizin low producing strain	63.195
DRR006525	Leaf Summer glycyrrhizin high producing strain	13.570
DRR006526	Leaf Summer glycyrrhizin high producing strain	14.824

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	61.492
SRR2868004	Drought Stress(Tissue:root)	60.052
SRR2967015	Control (Tissue:root)	67.052

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	32.397
SRR9715740	Leave	31.169
SRR9715741	Leave	45.656
SRR9715739	Root	95.960
SRR9715742	Root	102.926
SRR9715743	Root	98.130

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	62.472
SRR8749028	MeJA induced 9h	62.708
SRR8749029	MeJA induced 9h	47.134
SRR8749030	Uninduced	29.377
SRR8749031	Uninduced	11.914
SRR8749032	Uninduced	16.454

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	76.924
SRR8400027	Control-Root	82.089