Gene detail information of Glyur000018s00003741.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G53420.17.00E-171Leucine-rich repeat transmembrane protein kinase
NRXP_003616753.10Cysteine-rich receptor-like protein kinase [Medicago truncatula]
COGYP_004775215.12.00E-31RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprottr|C0LGG7|Y1534_ARATH0Probable LRR receptor-like serine/threonine-protein kinase At1g53420 (Precursor)
trEMBLtr|G7KH23|G7KH23_MEDTR0LRR receptor-like kinase {ECO:0000313|EMBL:AES99711.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00018423127442697+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.7.1
Carbohydrate-Active enzymes FamilyCBM57


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000018s00003741.2PF13855.1LRR_82382967.00E-07
Glyur000018s00003741.2PF11721.3Malectin3485262.80E-49
Glyur000018s00003741.2PF13516.1LRR_68218421.9
Glyur000018s00003741.2PF13516.1LRR_68919130.97
Glyur000018s00003741.2PF11721.3Malectin97511331.70E-36
Glyur000018s00003741.2PF07714.12Pkinase_Tyr117412605.40E-14


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.223
SRR1783600control0.231
SRR1783602moderate drought stress0.034
SRR1811619moderate drought stress0.055

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.178
DRR006520Root Summer glycyrrhizin high producing strain0.225
DRR006521Root Winter glycyrrhizin high producing strain0.046
DRR006522Root Winter glycyrrhizin high producing strain0.075
DRR006523Root Summer glycyrrhizin low producing strain0.080
DRR006524Root Summer glycyrrhizin low producing strain0.077
DRR006525Leaf Summer glycyrrhizin high producing strain0.467
DRR006526Leaf Summer glycyrrhizin high producing strain0.417

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)12.902
SRR2868004Drought Stress(Tissue:root)22.011
SRR2967015Control (Tissue:root)20.585

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave3.323
SRR9715740Leave1.435
SRR9715741Leave8.136
SRR9715739Root0.000
SRR9715742Root0.155
SRR9715743Root0.188

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h2.596
SRR8749028MeJA induced 9h26.610
SRR8749029MeJA induced 9h9.223
SRR8749030Uninduced21.547
SRR8749031Uninduced33.306
SRR8749032Uninduced16.980

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root5.845
SRR8400027Control-Root3.534

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved