Gene detail information of Glyur000018s00003744.3


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G14840.20Leucine-rich repeat transmembrane protein kinase
NRXP_004488995.10PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840-like isoform X1 [Cicer arietinum]
COGYP_004775215.13.00E-30RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprottr|C0LGN2|Y3148_ARATH0Probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840 (Precursor)
trEMBLtr|A0A072V9T0|A0A072V9T0_MEDTR0LRR receptor-like kinase {ECO:0000313|EMBL:KEH38577.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00018444072485743-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.7.1
Carbohydrate-Active enzymes FamilyCBM57


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000018s00003744.3PF00560.28LRR_11862051
Glyur000018s00003744.3PF11721.3Malectin2704558.00E-56
Glyur000018s00003744.3PF07714.12Pkinase_Tyr4646241.10E-21
Glyur000018s00003744.3PF00560.28LRR_19729891
Glyur000018s00003744.3PF11721.3Malectin106912541.30E-53
Glyur000018s00003744.3PF07714.12Pkinase_Tyr130214364.80E-19


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control34.347
SRR1783600control36.591
SRR1783602moderate drought stress23.004
SRR1811619moderate drought stress21.508

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain7.780
DRR006520Root Summer glycyrrhizin high producing strain7.013
DRR006521Root Winter glycyrrhizin high producing strain8.698
DRR006522Root Winter glycyrrhizin high producing strain8.410
DRR006523Root Summer glycyrrhizin low producing strain16.772
DRR006524Root Summer glycyrrhizin low producing strain16.554
DRR006525Leaf Summer glycyrrhizin high producing strain10.161
DRR006526Leaf Summer glycyrrhizin high producing strain9.795

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)6.402
SRR2868004Drought Stress(Tissue:root)13.884
SRR2967015Control (Tissue:root)13.447

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave18.391
SRR9715740Leave25.297
SRR9715741Leave25.348
SRR9715739Root4.346
SRR9715742Root30.804
SRR9715743Root25.881

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.799
SRR8749028MeJA induced 9h7.399
SRR8749029MeJA induced 9h2.078
SRR8749030Uninduced10.353
SRR8749031Uninduced4.654
SRR8749032Uninduced4.268

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root28.330
SRR8400027Control-Root39.683

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved