Gene detail information of Glyur000018s00003759.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G78580.10trehalose-6-phosphate synthase
NRXP_006594710.10PREDICTED: alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like isoform X2 [Glycine max]
COGYP_003951455.13.00E-156alpha,alpha-trehalose-phosphate synthase/trehalose-phosphatase [Stigmatella aurantiaca DW4/3-1]
Swissprottr|Q9SYM4|TPS1_ARATH0Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1
trEMBLtr|I1M2V8|I1M2V8_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G33970.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00018596594614997+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT20


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K16055TPS EC:2.4.1.15 3.1.3.12 Starch and sucrose metabolism map00500


Gene Ontology

biological_process

GO:0005992  trehalose biosynthetic process


molecular_function

GO:0003824  catalytic activity

GO:0003825  alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000018s00003759.2PF00982.16Glyco_transf_201075722.10E-191
Glyur000018s00003759.2PF02358.11Trehalose_PPase6267921.70E-54


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control12.211
SRR1783600control12.192
SRR1783602moderate drought stress11.792
SRR1811619moderate drought stress11.558

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain22.138
DRR006520Root Summer glycyrrhizin high producing strain22.160
DRR006521Root Winter glycyrrhizin high producing strain2.903
DRR006522Root Winter glycyrrhizin high producing strain2.879
DRR006523Root Summer glycyrrhizin low producing strain14.554
DRR006524Root Summer glycyrrhizin low producing strain15.083
DRR006525Leaf Summer glycyrrhizin high producing strain24.519
DRR006526Leaf Summer glycyrrhizin high producing strain24.442

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)42.687
SRR2868004Drought Stress(Tissue:root)31.744
SRR2967015Control (Tissue:root)28.115

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave11.506
SRR9715740Leave11.276
SRR9715741Leave9.698
SRR9715739Root2.656
SRR9715742Root24.566
SRR9715743Root21.276

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.232
SRR8749028MeJA induced 9h0.534
SRR8749029MeJA induced 9h0.491
SRR8749030Uninduced0.114
SRR8749031Uninduced0.016
SRR8749032Uninduced0.026

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root20.011
SRR8400027Control-Root23.062

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved