Gene detail information of Glyur000019s00002090.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G04040.10Patatin-like phospholipase family protein
NRXP_003521151.20PREDICTED: triacylglycerol lipase SDP1-like [Glycine max]
COGYP_693301.14.00E-77hypothetical protein ABO_1581 [Alcanivorax borkumensis SK2]
Swissprottr|Q9LZA6|SDP1_ARATH0Triacylglycerol lipase SDP1
trEMBLtr|I1JN82|I1JN82_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G28660.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold000194830652733-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K14674TGL4 EC:3.1.1.3 3.1.1.13 3.1.1.4 2.3.1.51 Steroid biosynthesis map00100
Glycerolipid metabolismmap00561
Glycerophospholipid metabolismmap00564
Ether lipid metabolismmap00565
Arachidonic acid metabolismmap00590
Linoleic acid metabolismmap00591
alpha-Linolenic acid metabolismmap00592


Gene Ontology

biological_process

GO:0006629  lipid metabolic process

GO:0008152  metabolic process



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000019s00002090.1PF11815.3DUF3336922273.50E-28
Glyur000019s00002090.1PF01734.17Patatin2344251.30E-14


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.169
SRR1783600control1.185
SRR1783602moderate drought stress2.029
SRR1811619moderate drought stress2.028

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.546
DRR006520Root Summer glycyrrhizin high producing strain1.569
DRR006521Root Winter glycyrrhizin high producing strain8.376
DRR006522Root Winter glycyrrhizin high producing strain8.285
DRR006523Root Summer glycyrrhizin low producing strain2.640
DRR006524Root Summer glycyrrhizin low producing strain2.644
DRR006525Leaf Summer glycyrrhizin high producing strain19.118
DRR006526Leaf Summer glycyrrhizin high producing strain19.173

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)4.487
SRR2868004Drought Stress(Tissue:root)12.142
SRR2967015Control (Tissue:root)13.560

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave20.236
SRR9715740Leave23.180
SRR9715741Leave26.529
SRR9715739Root0.961
SRR9715742Root1.826
SRR9715743Root1.508

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h11.217
SRR8749028MeJA induced 9h13.765
SRR8749029MeJA induced 9h8.476
SRR8749030Uninduced5.380
SRR8749031Uninduced20.145
SRR8749032Uninduced14.373

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root3.479
SRR8400027Control-Root2.882

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved