Gene detail information of Glyur000019s00002103.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G41450.1 | 4.00E-157 | N-acetyltransferases;N-acetyltransferases |
| NR | ABD33312.1 | 0 | GCN5-related N-acetyltransferase; BRCT [Medicago truncatula] |
| trEMBL | tr|Q2HRG1|Q2HRG1_MEDTR | 0 | N-acetyltransferase {ECO:0000313|EMBL:AES81295.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00019 | 121964 | 127937 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | GNAT |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000019s00002103.1 | PF00583.19 | Acetyltransf_1 | 135 | 208 | 1.90E-06 |
| Glyur000019s00002103.1 | PF00533.21 | BRCT | 466 | 524 | 0.0002 |
| Glyur000019s00002103.1 | PF00533.21 | BRCT | 564 | 640 | 0.00015 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.278 |
| SRR1783600 | control | 3.262 |
| SRR1783602 | moderate drought stress | 2.774 |
| SRR1811619 | moderate drought stress | 2.773 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.302 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.283 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.621 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.682 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.346 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.403 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.329 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.354 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 5.854 |
| SRR2868004 | Drought Stress(Tissue:root) | 5.584 |
| SRR2967015 | Control (Tissue:root) | 5.328 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 2.725 |
| SRR9715740 | Leave | 1.767 |
| SRR9715741 | Leave | 1.535 |
| SRR9715739 | Root | 0.395 |
| SRR9715742 | Root | 1.594 |
| SRR9715743 | Root | 1.035 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 12.507 |
| SRR8749028 | MeJA induced 9h | 9.080 |
| SRR8749029 | MeJA induced 9h | 8.366 |
| SRR8749030 | Uninduced | 3.123 |
| SRR8749031 | Uninduced | 3.479 |
| SRR8749032 | Uninduced | 2.493 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 4.585 |
| SRR8400027 | Control-Root | 3.871 |