Gene detail information of Glyur000019s00002176.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G41820.10Leucine-rich repeat protein kinase family protein
NRKHN26318.10Leucine-rich repeat receptor-like tyrosine-protein kinase [Glycine soja]
COGYP_004775215.12.00E-56RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprottr|O22938|Y2182_ARATH0Leucine-rich repeat receptor-like tyrosine-protein kinase At2g41820 (Precursor)
trEMBLtr|I1N913|I1N913_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G32200.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00019545949549439+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000019s00002176.1PF13855.1LRR_8901471.50E-12
Glyur000019s00002176.1PF00560.28LRR_12102300.86
Glyur000019s00002176.1PF00560.28LRR_12332551.2
Glyur000019s00002176.1PF13855.1LRR_83293882.10E-06
Glyur000019s00002176.1PF00560.28LRR_14504710.11
Glyur000019s00002176.1PF00069.20Pkinase6118811.60E-27


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control8.709
SRR1783600control8.618
SRR1783602moderate drought stress10.145
SRR1811619moderate drought stress10.091

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain11.371
DRR006520Root Summer glycyrrhizin high producing strain11.090
DRR006521Root Winter glycyrrhizin high producing strain0.065
DRR006522Root Winter glycyrrhizin high producing strain0.064
DRR006523Root Summer glycyrrhizin low producing strain4.596
DRR006524Root Summer glycyrrhizin low producing strain4.626
DRR006525Leaf Summer glycyrrhizin high producing strain0.740
DRR006526Leaf Summer glycyrrhizin high producing strain0.735

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)17.608
SRR2868004Drought Stress(Tissue:root)14.822
SRR2967015Control (Tissue:root)15.526

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.905
SRR9715740Leave0.422
SRR9715741Leave0.244
SRR9715739Root10.933
SRR9715742Root6.764
SRR9715743Root7.421

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h2.135
SRR8749028MeJA induced 9h0.445
SRR8749029MeJA induced 9h0.387
SRR8749030Uninduced0.001
SRR8749031Uninduced0.116
SRR8749032Uninduced0.000

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root17.452
SRR8400027Control-Root17.850

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved