Gene detail information of Glyur000020s00001732.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G37510.10NADH-ubiquinone dehydrogenase, mitochondrial, putative
NRXP_004503119.10PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 1, mitochondrial-like [Cicer arietinum]
COGYP_002297459.10NADH dehydrogenase subunit G [Rhodospirillum centenum SW]
Swissprottr|Q43644|NDUS1_SOLTU0NADH dehydrogenase [ubiquinone] iron-sulfur protein 1, mitochondrial (Precursor)
trEMBLtr|I1MZF9|I1MZF9_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G04730.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold000201694222434+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K03934NDUFS1 EC:1.6.5.3 1.6.99.3 Oxidative phosphorylation map00190
Alzheimer's diseasemap05010
Parkinson's diseasemap05012
Huntington's diseasemap05016
Non-alcoholic fatty liver disease (NAFLD)map04932


Gene Ontology

biological_process

GO:0042773  ATP synthesis coupled electron transport

GO:0055114  oxidation-reduction process


cellular_component

GO:0016020  membrane


molecular_function

GO:0008137  NADH dehydrogenase (ubiquinone) activity

GO:0009055  electron carrier activity

GO:0016491  oxidoreductase activity

GO:0016651  oxidoreductase activity, acting on NAD(P)H

GO:0051536  iron-sulfur cluster binding

"

Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000020s00001732.1PF13510.1Fer2_4741511.90E-17
Glyur000020s00001732.1PF10588.4NADH-G_4Fe-4S_31571975.60E-17
Glyur000020s00001732.1PF00384.17Molybdopterin3456667.10E-71
Glyur000020s00001732.1PF09326.6DUF19827117425.60E-12


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control72.687
SRR1783600control73.038
SRR1783602moderate drought stress57.966
SRR1811619moderate drought stress57.337

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain88.595
DRR006520Root Summer glycyrrhizin high producing strain87.629
DRR006521Root Winter glycyrrhizin high producing strain63.745
DRR006522Root Winter glycyrrhizin high producing strain62.018
DRR006523Root Summer glycyrrhizin low producing strain62.395
DRR006524Root Summer glycyrrhizin low producing strain62.651
DRR006525Leaf Summer glycyrrhizin high producing strain46.066
DRR006526Leaf Summer glycyrrhizin high producing strain45.815

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)110.152
SRR2868004Drought Stress(Tissue:root)93.127
SRR2967015Control (Tissue:root)85.303

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave56.256
SRR9715740Leave53.046
SRR9715741Leave56.937
SRR9715739Root69.204
SRR9715742Root95.375
SRR9715743Root91.884

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h59.751
SRR8749028MeJA induced 9h80.851
SRR8749029MeJA induced 9h44.442
SRR8749030Uninduced45.394
SRR8749031Uninduced22.545
SRR8749032Uninduced27.700

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root92.678
SRR8400027Control-Root98.923

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved