Gene detail

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Gene detail information of Glyur000020s00001748.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G56790.1	3.00E-64	Protein kinase superfamily protein
NR	KEH16379.1	0	dual-specificity kinase domain protein [Medicago truncatula]
COG	YP_005269820.1	2.00E-18	serine/threonine-protein kinase PrkC [Acetobacterium woodii DSM 1030]
Swissprot	tr\|Q9FFW5\|PERK8_ARATH	5.00E-57	Proline-rich receptor-like protein kinase PERK8
trEMBL	tr\|A0A072TFT8\|A0A072TFT8_MEDTR	0	Dual-specificity kinase domain protein {ECO:0000313\|EMBL:KEH16379.1}

Sequence

Transcript Sequence

>Glyur000020s00001748.1
ATGGCCGTTGAACCAAAGCGTGTGGTGGTGATACAGGATGCATCTAAAGAGCTAAATCTGAGAGTGTTTTATTGGGTTATGAATAGCTTATCACTTAAGCAAGCAGATACGGTCACACTACTTGCAATCCTGCATAAGTTTTACACTCCCATGGGGTACAAAAGCATNGTGGACAACAATGCAATGGTTGGAGTAAACCAGCGGATCATTGAGGAACAACTTGCATGGAAGAAGCAAGAGTATCTGAACCATGGGGCGCTTGAAATGATTGCTGAACTGTATGAATCAAATAAGGTTGCATTTAAGGTACAGTTGCTTACAGGATCACCGAAAGATGTTGCTTTAAAAGAAGCCATAAATCTAAAGGCAACTTGGGTGATACTTGACAGGCAAATGAAGAGAGATGAGGAGTTTTTCNTGGAGAACCTTTCTTGTGGTATATCAAGAGTAAGGCGTGGAAATCGGATAGTACGCCTGAGAGGACCTCTAGATCTTGCTGTTGAAATACCATGTAACAGCCATGAAACATATGATGGTCAAAGTGATGATATTGTTTCCAAGAGCCCAATCAATGTTGAAGGGGAGAGCCAGACAAGTCCTGATGTGTACCTGAGCACNGAGGAACCGGACGTAAACAGTATCCAAATGATAGATAAAACAGAAGATAATCAATGCCAAGATCAAGAACATATACCAAAAATGCCTCCTGAGGATGATAAGGAGACAACATTTGTGATTAACAATGATCAAACAACTGCTCAAGAAATAGCTGATCAACACAGCCAGGATGTAGAAAAGACACAGAACTTCCATGATGAGGAGCAGTACTTGAGCCGTCCAACAAAGAGTAAAGAAATTATTGATCAAACAAAAGATGATCAGATAAACCAGAATCAAACACAACAGACACAGNGAGTTTCCCATGAGGGTATATTGGATGGAGAGCAAAAGAATAGCATTTTGGAAAATTCAGTGTGCTCTATATACCCTGTCTGCAAAGGTAGAAGGCCTAATATTGAATGGCAAAAGGAATTCACTTATGAAGAACTTGAAGCAGCCACAGACGGGTTTTCATTGAAGAACTGTCTCTCTGAAAGTGGATATTCATTCTCCACTTTCAAAGGCCATCTGGAGGGAGAGCTGAAAATAGTAGTTAAGCAGCATGAAATAACAAACACTCAAGTAAGGGAAAAAATGAAGTCAGAAGTCCAAACCATCCTCAAAACTAGACATAAGAATGTGGCCATGCTATTGGGTTCATCTACAAAAGATCGTTTCATGTTGATTGTATATGAGTATGCATGCAATGGTTCACTTGACAAGTATCTATCAAGGGAAAGCTGCAGACCATTGACCTGGAGTGAAAGGCTGAGTGTGGCGATGGGTCTCTCCAGAGGTCTAAAGCACCTACATGACAATAATATTATTCATGGCAATATAAAACCAAGTAATATTCTTCTAGCACATGACTTCAAACCACTGCTTGGAGATTTTGACCTTGGGAAGAAACTTGAAAGGAAGAAGTCATACAATAATAAAAACATGGGGAATTCAGAATACACAGCACCAGAGTATCAGGAGAAGGGGGAACTATCAACTAAAACAGATGTATACTCGTTTGGTATGGTTATTTTAGAGTTGATCACAGGACGGAGGGCTACAGATAAGATATCAGGAGAGAAAAGTCTTGTTGGATGGGCAAAGCCTCTTCTTGGAGGAAAGAATTACTCAAAGTTGGTGGATCCCATAATCAGCAAATCGTATGAAGAAGACCACCTTCGTTGGCTGGTGCAAGTAACAGCAAAATGTCTCAAAAAGAATCCTAAGGANAGATTATCCATGAACATGGTTGTTTCTGCATTACAAGGCATAGCAGATAGTGAACAAAGCCACATTGCAGAAGGCTTAATTNCAGAGACATATTCTATACTGCTGCCTGGTATGAATGATTCACAAGTTCAGGCAACTTCCACATTACAAGGCACATCGGACAGCGGACAGTGCTGCATGACGGAAGACTTTACTCCAGCTGTATCATATTCAAGATTAGTGTCAGACATAAATGGTTCACAAGGTCCAAGAGAAACTGATCACCCAAGTCAGATNGAGAAGCAGATAGAGAGCAGTTCCTTCAGGGAGGAAGGGGGGTTAAGACTAAGAGTTGAAAACAATCACTTTTACAAAACAGGCCAGAGAAACTCTGATACACTGAACCAGATTGAAGAACAGATGCAGAGCAGGCCCCAAGGGGTGGAAAGGAGCTCAGGAAAGATGGTAATAAATGACCACGTGATGGATCAGACAGTAAATGCTCATCCGAGTGAATTTGAAGAACATATGAAGTGCACCCTCAATGGGGAGGGCATCTCAACACAGAAAATTTGCAATAACCACATGATAGGTCAGACAATTATTGACCAGCTGAGCCAGGATAAAACACAACTGCAGAGTAGCTCCAATGAGAATTTACTGGATGGACATCATGATGAAATCATTTTGGAGAATTCAAATTCCTCAGCATGCTCCATTTGCAAAAGTAAACGCCCAAAAATCNCATGGATGAAAGACTTTACATATGACGAACTCCTAGAAGCTACAAAAGGATTTTCAGTTGAGAACTCTCTATCCGAAAGTGAAGATGGACCTACTTTCAAAGGCCTGCTAGAGAGTAAGGTGAAAATAGTTGTTAAGAAATATCAAATTACTAGGTCTCAGGAAGAGAAGATATTCAAGTTAGAAGTCCAGTTGCTTACGAATGCTAGACACAAAAATGTGGCCATGCTGTTGGGTTTATGCACAGATAAAAATCAATTGATGATTGTGTATGAACAAGTATGCAATGGTTCTCTTGATCATTACCTATCAAGGGGAAATTTCCAGTCATTGACATGGAGGGAAAGGATGAAAGTAGCAGTAGGTACTGCCAGAGGTTTAAAGTACCTACATGATAATAACATAATTCATGGAAGTATAAAAGCAAGTAACATTCTTCTAACACATGACCTTGAACCACTGATTGGAGACTTTGGCTTCAGAAAAGTAAAACTTGAACCAAAGAAACCCTACAAAGATAGAAGTGCAACAGATTCTGGATATACAGCACCTGAGTATCTGGAGAGTGGGAAACTATCAACTAAGGCAGATGTATTCTCCTTTGGAGTGGTTCTTTTGGAGCTGATCACTGGTCGGAGGGCCACAGANAAACTACCAGGAGGCAAAAACCTTGTTGGATGGGCAANGCCACTACTGGGAGGAAAGAAGTATCCACAGTTAGTGGATCCAAAAATCAGTAACTCCTATGAAGAAGAACAACTTCTATGGTTGGTCCCAGTAATAGAACAATGTCTCAGAAAGAATCCTAAGGAAAGAATTACAATGAATATGGTTGTATCTGCAATACAAGGCATAGCAGAATCAGATGGGTGCTGTGCAANTGAAGAATCTTCTCCAGAAAAGTCATATGTACAAAATGATGAGCCGGTCATGTCTAGCTCACAAGGTCAAATGAAGGCTGATCCGGTGAGCCAGGAACAAGAACGGATAGACAGAAACACATACAACGAAGAGACAAGCTTCGGAATAGCAATTAAAACCAATCACGTGATAGGTCAGAATAAACCTGATAAGCTGAAACAGGATGGAGAACAGATGCAGAGCAGGCCTCNTGGGGAGGAGATGTCCGGAGTGACAATTATCAGCAATCACATGATCGAACAGATAAGCCCTGATCAACAGATCCAGGNAAAACAACAGAACAAAGAAAGCTTCCACATAGAAGAGATAGGAAAAACAGAAGTAGATATACAACAGAAGGTGNGCAAGGATAAAAAACAAATGCAAGGCAGCTGTGATGAGGGTTTATTGAATGAGAATCAAGACAAAACCATTTTGCAGATTTCAAAGTCTTCTGTATGCTCAATCTGCAAAAGTAGACGCCCAAATAATGGATGGCAAAGGAAATTTACTTATGAAGAACTCCAAGCTGCTACTGAAGGATTTTCAATTAAGTATTCTCTATCTGAAGGTGAATATGGACCTTCCTTCAGAGGTCAGCTAGATAATAAGCTAAAAATAGCAATTAAGCAACATCAAATCACAAGCTTGCAGGAAGAGAAGGTGTTTATGTCAGAAGTCCAGTTGCTCACAAATGCTAGACATGAAAATGTGACCATGCTGTTGGGAGAAAGTGGCATATCATTGACTTGGAGAGAAAGGATGAAAATTGCAATAGGTGTATCCAGAGGTCTAAAGTATATCCATGAGAATAACATAATACATGGAAGAATAAAACCAAGTAACATTTTTCTAAATCATGACTATAAACCATTGCTCGGAGATTTTGTGTTTGGAAAAGAAAGACNTGAATTGAAGAGCAGCAGCAAGGATAAAAGTCTGTCGAAATGTGGGTACAGTGCACCAGAGTGTCAGGGGTGTGGAAAACTATCAACTNAGGCAGATGTGTACTCTTTTGGTGCAGTTATTTTAGAGTTGATCACCGGCCGTATGATTTCAGATAAAATAACAGGACAGAAATGTCTTATTGAATGGGCAAGGCCACTTCTTGGAGGAAGGAAGTACCTACAGTTGGCGGATCCCAAAATCAGCAGCTCCTATGATGAACAAGAACTTGCTTCATTGGTCCTAGTTGTCTCTGCAATGCCGTGTGCAGTTGATAGCAAAGACGTTCATGAATTTGGAGACTCNTCATCAGAAACGCCATATGTAGTATGCTACGGTTCAGATGTAACAAGCTCAAAAGATGAGGAGGAATTACCTGAAGAGGAAGAAGATTTAGGCACAGAGATTTGTGATGAAAGAGAGCACAGCATAACATGTAGTAGAAGCAACGGTGAAACAGAAATTGGTGAAGAGAGTGATAGCTACACAACTTGTGGTGAACCTTGTAAGAAAACAACACAAGAAAAAGAAAGCACCAGNACTTACACCACGGCATGTCAAGACGGGGAACGGTGCGAATCTTATGGTGGAGCTAGAGACTTTTTTCTCGAAAGGGCTCNAGAATATATAGCATGTGAGGAATTTTTTAGCTTGTGTAATTCAATTTAA

Protein Sequence

>Glyur000020s00001748.1
MAVEPKRVVVIQDASKELNLRVFYWVMNSLSLKQADTVTLLAILHKFYTPMGYKSXVDNNAMVGVNQRIIEEQLAWKKQEYLNHGALEMIAELYESNKVAFKVQLLTGSPKDVALKEAINLKATWVILDRQMKRDEEFFXENLSCGISRVRRGNRIVRLRGPLDLAVEIPCNSHETYDGQSDDIVSKSPINVEGESQTSPDVYLSTEEPDVNSIQMIDKTEDNQCQDQEHIPKMPPEDDKETTFVINNDQTTAQEIADQHSQDVEKTQNFHDEEQYLSRPTKSKEIIDQTKDDQINQNQTQQTQXVSHEGILDGEQKNSILENSVCSIYPVCKGRRPNIEWQKEFTYEELEAATDGFSLKNCLSESGYSFSTFKGHLEGELKIVVKQHEITNTQVREKMKSEVQTILKTRHKNVAMLLGSSTKDRFMLIVYEYACNGSLDKYLSRESCRPLTWSERLSVAMGLSRGLKHLHDNNIIHGNIKPSNILLAHDFKPLLGDFDLGKKLERKKSYNNKNMGNSEYTAPEYQEKGELSTKTDVYSFGMVILELITGRRATDKISGEKSLVGWAKPLLGGKNYSKLVDPIISKSYEEDHLRWLVQVTAKCLKKNPKXRLSMNMVVSALQGIADSEQSHIAEGLIXETYSILLPGMNDSQVQATSTLQGTSDSGQCCMTEDFTPAVSYSRLVSDINGSQGPRETDHPSQXEKQIESSSFREEGGLRLRVENNHFYKTGQRNSDTLNQIEEQMQSRPQGVERSSGKMVINDHVMDQTVNAHPSEFEEHMKCTLNGEGISTQKICNNHMIGQTIIDQLSQDKTQLQSSSNENLLDGHHDEIILENSNSSACSICKSKRPKIXWMKDFTYDELLEATKGFSVENSLSESEDGPTFKGLLESKVKIVVKKYQITRSQEEKIFKLEVQLLTNARHKNVAMLLGLCTDKNQLMIVYEQVCNGSLDHYLSRGNFQSLTWRERMKVAVGTARGLKYLHDNNIIHGSIKASNILLTHDLEPLIGDFGFRKVKLEPKKPYKDRSATDSGYTAPEYLESGKLSTKADVFSFGVVLLELITGRRATXKLPGGKNLVGWAXPLLGGKKYPQLVDPKISNSYEEEQLLWLVPVIEQCLRKNPKERITMNMVVSAIQGIAESDGCCAXEESSPEKSYVQNDEPVMSSSQGQMKADPVSQEQERIDRNTYNEETSFGIAIKTNHVIGQNKPDKLKQDGEQMQSRPXGEEMSGVTIISNHMIEQISPDQQIQXKQQNKESFHIEEIGKTEVDIQQKVXKDKKQMQGSCDEGLLNENQDKTILQISKSSVCSICKSRRPNNGWQRKFTYEELQAATEGFSIKYSLSEGEYGPSFRGQLDNKLKIAIKQHQITSLQEEKVFMSEVQLLTNARHENVTMLLGESGISLTWRERMKIAIGVSRGLKYIHENNIIHGRIKPSNIFLNHDYKPLLGDFVFGKERXELKSSSKDKSLSKCGYSAPECQGCGKLSTXADVYSFGAVILELITGRMISDKITGQKCLIEWARPLLGGRKYLQLADPKISSSYDEQELASLVLVVSAMPCAVDSKDVHEFGDSSSETPYVVCYGSDVTSSKDEEELPEEEEDLGTEICDEREHSITCSRSNGETEIGEESDSYTTCGEPCKKTTQEKESTXTYTTACQDGERCESYGGARDFFLERAXEYIACEEFFSLCNSI

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00020	98998	111202	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.6.2

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function GO:0004672 protein kinase activity GO:0005524 ATP binding GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000020s00001748.1	PF00069.20	Pkinase	382	618	1.00E-37
Glyur000020s00001748.1	PF07714.12	Pkinase_Tyr	874	1132	2.70E-41
Glyur000020s00001748.1	PF00069.20	Pkinase	1399	1506	1.50E-18

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.086
SRR1783600	control	0.088
SRR1783602	moderate drought stress	0.054
SRR1811619	moderate drought stress	0.049

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.066
DRR006520	Root Summer glycyrrhizin high producing strain	0.085
DRR006521	Root Winter glycyrrhizin high producing strain	0.088
DRR006522	Root Winter glycyrrhizin high producing strain	0.053
DRR006523	Root Summer glycyrrhizin low producing strain	0.102
DRR006524	Root Summer glycyrrhizin low producing strain	0.107
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.838
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.722

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	0.220
SRR2868004	Drought Stress(Tissue:root)	0.409
SRR2967015	Control (Tissue:root)	0.362

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	0.140
SRR9715740	Leave	0.260
SRR9715741	Leave	0.101
SRR9715739	Root	0.014
SRR9715742	Root	0.018
SRR9715743	Root	0.000

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.064
SRR8749028	MeJA induced 9h	0.048
SRR8749029	MeJA induced 9h	0.049
SRR8749030	Uninduced	0.262
SRR8749031	Uninduced	0.726
SRR8749032	Uninduced	0.640

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	0.414
SRR8400027	Control-Root	0.144