Gene detail information of Glyur000020s00001759.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G62670.10H(+)-ATPase 11
NRXP_002322127.10putative plasma membrane H+ ATPase family protein [Populus trichocarpa]
COGYP_006722443.15.00E-176cation-translocating P-type ATPase [Geobacter metallireducens GS-15]
Swissprottr|Q9LV11|PMA11_ARATH0ATPase 11, plasma membrane-type
trEMBLtr|B9IEG7|B9IEG7_POPTR0Putative plasma membrane H+ ATPase family protein {ECO:0000313|EMBL:EEF06254.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00020166721174216-


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01535PMA1, PMA2 EC:3.6.3.6 Oxidative phosphorylation map00190


Gene Ontology

biological_process

GO:0006754  ATP biosynthetic process


cellular_component

GO:0016021  integral component of membrane


molecular_function

GO:0000166  nucleotide binding

GO:0016887  ATPase activity

GO:0046872  metal ion binding

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000020s00001759.1PF00690.21Cation_ATPase_N20831.30E-13
Glyur000020s00001759.1PF00122.15E1-E2_ATPase1023927.90E-51
Glyur000020s00001759.1PF13961.1DUF42192813076.40E-12
Glyur000020s00001759.1PF00702.21Hydrolase3966731.80E-22


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control12.019
SRR1783600control12.182
SRR1783602moderate drought stress7.716
SRR1811619moderate drought stress7.766

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain12.690
DRR006520Root Summer glycyrrhizin high producing strain12.365
DRR006521Root Winter glycyrrhizin high producing strain3.225
DRR006522Root Winter glycyrrhizin high producing strain3.114
DRR006523Root Summer glycyrrhizin low producing strain8.075
DRR006524Root Summer glycyrrhizin low producing strain8.090
DRR006525Leaf Summer glycyrrhizin high producing strain69.975
DRR006526Leaf Summer glycyrrhizin high producing strain69.597

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)21.331
SRR2868004Drought Stress(Tissue:root)13.597
SRR2967015Control (Tissue:root)13.690

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave38.001
SRR9715740Leave36.788
SRR9715741Leave39.289
SRR9715739Root2.014
SRR9715742Root8.166
SRR9715743Root7.508

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h7.793
SRR8749028MeJA induced 9h9.224
SRR8749029MeJA induced 9h5.242
SRR8749030Uninduced0.737
SRR8749031Uninduced0.707
SRR8749032Uninduced1.193

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root18.431
SRR8400027Control-Root22.715

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved