Gene detail information of Glyur000020s00001784.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G47800.16.00E-124Galactose mutarotase-like superfamily protein
NRAFK38126.10unknown [Lotus japonicus]
COGYP_004271367.12.00E-92aldose 1-epimerase [Planctomyces brasiliensis DSM 5305]
trEMBLtr|I3SCY4|I3SCY4_LOTJA0Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00020291864293790+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01785galM, GALM EC:5.1.3.3 Glycolysis / Gluconeogenesis map00010
Galactose metabolismmap00052


Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process

GO:0019318  hexose metabolic process


molecular_function

GO:0003824  catalytic activity

GO:0016853  isomerase activity

GO:0030246  carbohydrate binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000020s00001784.1PF01263.15Aldose_epim303503.80E-91


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.410
SRR1783600control0.405
SRR1783602moderate drought stress0.197
SRR1811619moderate drought stress0.197

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.030
DRR006520Root Summer glycyrrhizin high producing strain1.019
DRR006521Root Winter glycyrrhizin high producing strain4.436
DRR006522Root Winter glycyrrhizin high producing strain4.285
DRR006523Root Summer glycyrrhizin low producing strain0.283
DRR006524Root Summer glycyrrhizin low producing strain0.286
DRR006525Leaf Summer glycyrrhizin high producing strain3.346
DRR006526Leaf Summer glycyrrhizin high producing strain3.200

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.974
SRR2868004Drought Stress(Tissue:root)0.759
SRR2967015Control (Tissue:root)1.126

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.486
SRR9715740Leave1.365
SRR9715741Leave0.422
SRR9715739Root1.082
SRR9715742Root0.606
SRR9715743Root0.541

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h8.698
SRR8749028MeJA induced 9h18.562
SRR8749029MeJA induced 9h12.198
SRR8749030Uninduced10.836
SRR8749031Uninduced17.792
SRR8749032Uninduced22.617

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root1.345
SRR8400027Control-Root1.168

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved