Gene detail information of Glyur000020s00001835.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G61380.12.00E-129CCT motif -containing response regulator protein
NRXP_003523010.10PREDICTED: two-component response regulator-like APRR1-like isoform X1 [Glycine max]
COGYP_007102289.16.00E-13response regulator receiver modulated diguanylate cyclase [Pseudanabaena sp. PCC 7367]
Swissprottr|Q9LKL2|APRR1_ARATH3.00E-174Two-component response regulator-like APRR1
trEMBLtr|I1JWS5|I1JWS5_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G33110.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00020552365557156+


Gene family

Gene familysubfamily
Transcription Factors FamilyPseudo ARR-B


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0000160  phosphorelay signal transduction system


molecular_function

GO:0005515  protein binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000020s00001835.1PF00072.19Response_reg351465.00E-16
Glyur000020s00001835.1PF06203.9CCT4735157.90E-18


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control7.715
SRR1783600control7.825
SRR1783602moderate drought stress9.570
SRR1811619moderate drought stress9.732

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain30.509
DRR006520Root Summer glycyrrhizin high producing strain29.916
DRR006521Root Winter glycyrrhizin high producing strain20.302
DRR006522Root Winter glycyrrhizin high producing strain19.929
DRR006523Root Summer glycyrrhizin low producing strain39.847
DRR006524Root Summer glycyrrhizin low producing strain39.999
DRR006525Leaf Summer glycyrrhizin high producing strain29.224
DRR006526Leaf Summer glycyrrhizin high producing strain29.319

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)19.870
SRR2868004Drought Stress(Tissue:root)17.884
SRR2967015Control (Tissue:root)31.679

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave3.591
SRR9715740Leave6.100
SRR9715741Leave5.219
SRR9715739Root2.173
SRR9715742Root6.311
SRR9715743Root5.561

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h12.414
SRR8749028MeJA induced 9h24.069
SRR8749029MeJA induced 9h11.707
SRR8749030Uninduced14.390
SRR8749031Uninduced7.529
SRR8749032Uninduced9.387

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root18.952
SRR8400027Control-Root16.709

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved