Gene detail information of Glyur000021s00002688.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G59660.11.00E-73Leucine-rich repeat protein kinase family protein
NRKEH18251.11.99E-152LRR receptor-like kinase plant [Medicago truncatula]
COGYP_003154850.17.00E-12serine/threonine protein kinase [Brachybacterium faecium DSM 4810]
Swissprottr|O65924|Y2921_ARATH5.00E-80Putative leucine-rich repeat receptor-like protein kinase At2g19210 (Precursor)
trEMBLtr|A0A072TM03|A0A072TM03_MEDTR7.00E-153LRR receptor-like kinase plant {ECO:0000313|EMBL:KEH18251.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold000214047553965-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.1.5


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000021s00002688.1PF12819.2Malectin_like11201.50E-18
Glyur000021s00002688.1PF12799.2LRR_41722082.60E-08
Glyur000021s00002688.1PF00069.20Pkinase3364282.90E-19
Glyur000021s00002688.1PF12819.2Malectin_like5436543.10E-31


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.156
SRR1783600control2.138
SRR1783602moderate drought stress1.839
SRR1811619moderate drought stress1.514

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.686
DRR006520Root Summer glycyrrhizin high producing strain0.757
DRR006521Root Winter glycyrrhizin high producing strain1.257
DRR006522Root Winter glycyrrhizin high producing strain0.719
DRR006523Root Summer glycyrrhizin low producing strain1.332
DRR006524Root Summer glycyrrhizin low producing strain0.770
DRR006525Leaf Summer glycyrrhizin high producing strain10.787
DRR006526Leaf Summer glycyrrhizin high producing strain10.219

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.640
SRR2868004Drought Stress(Tissue:root)0.714
SRR2967015Control (Tissue:root)0.402

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave12.302
SRR9715740Leave3.215
SRR9715741Leave25.721
SRR9715739Root0.012
SRR9715742Root0.995
SRR9715743Root0.919

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.000
SRR8749028MeJA induced 9h0.000
SRR8749029MeJA induced 9h0.000
SRR8749030Uninduced0.048
SRR8749031Uninduced0.054
SRR8749032Uninduced0.000

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root3.106
SRR8400027Control-Root2.671

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved