Gene detail information of Glyur000021s00002690.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G14520.24.00E-135myo-inositol oxygenase 1
NRKEH18252.10myo-inositol oxygenase [Medicago truncatula]
Swissprottr|Q8L799|MIOX1_ARATH1.00E-168Inositol oxygenase 1
trEMBLtr|A0A072TLF4|A0A072TLF4_MEDTR0Myo-inositol oxygenase {ECO:0000313|EMBL:KEH18252.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold000216210765919-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00469MIOX EC:1.13.99.1 Ascorbate and aldarate metabolism map00053
Inositol phosphate metabolismmap00562


Gene Ontology

biological_process

GO:0019310  inositol catabolic process

GO:0055114  oxidation-reduction process


cellular_component

GO:0005737  cytoplasm


molecular_function

GO:0005506  iron ion binding

GO:0050113  inositol oxygenase activity

"

Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000021s00002690.1PF05153.10DUF706532989.70E-120


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control39.288
SRR1783600control39.111
SRR1783602moderate drought stress71.999
SRR1811619moderate drought stress71.664

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain37.075
DRR006520Root Summer glycyrrhizin high producing strain36.421
DRR006521Root Winter glycyrrhizin high producing strain83.265
DRR006522Root Winter glycyrrhizin high producing strain80.897
DRR006523Root Summer glycyrrhizin low producing strain2.436
DRR006524Root Summer glycyrrhizin low producing strain2.291
DRR006525Leaf Summer glycyrrhizin high producing strain1.366
DRR006526Leaf Summer glycyrrhizin high producing strain1.474

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)29.970
SRR2868004Drought Stress(Tissue:root)111.620
SRR2967015Control (Tissue:root)111.605

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave8.547
SRR9715740Leave15.380
SRR9715741Leave32.457
SRR9715739Root3.477
SRR9715742Root25.921
SRR9715743Root22.097

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h58.249
SRR8749028MeJA induced 9h324.854
SRR8749029MeJA induced 9h76.229
SRR8749030Uninduced465.655
SRR8749031Uninduced270.374
SRR8749032Uninduced249.348

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root21.397
SRR8400027Control-Root11.984

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved