Gene detail

Home
Network
Tools
- Search
- Blast
- Motif
- GSEA
- Heatmap Analysis
- JBrowse
Gene family
KEGG
Download
Help

Gene detail information of Glyur000021s00002694.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G29990.1	0	Leucine-rich repeat transmembrane protein kinase protein
NR	XP_006586416.1	0	PREDICTED: LOW QUALITY PROTEIN: probable LRR receptor-like serine/threonine-protein kinase At1g51860-like [Glycine max]
COG	YP_001958461.1	7.00E-20	hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprot	tr\|C0LGG6\|Y5189_ARATH	0	Probable LRR receptor-like protein kinase At1g51890 (Precursor)
trEMBL	tr\|I1KGG3\|I1KGG3_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA07G01620.1}

Sequence

Transcript Sequence

>Glyur000021s00002694.1
ATGATGGCATTGTCTCTGCATTTTCTTTTGGCATTGCTTGGGGTCCTTACTTCTGTGGTTTTGGTACAAGCTCAAGATCAATCAGAGAAGACCACAGGCATAAATTACATTTCAGATGCCAAATTTATAGCTACTGGTGTGAGTAAGAGTATATCGCCTGCAGAGAAGATTACTCATCAGCAGCAACTAAGTTATGTGAGGAGCTTTCCCAGTGGAGTGAGGNACTGTTACAGAATAAATGTAACCAGTGGTACCAAATATTTAATCANAGCTTCTTTCTATTATGGAAACTATGATGGTCTAAATGAGGTCCCACAATTTGATCTTCATCTTGGAGCTAATCTATGGGACACAGTGAAGTTCCCCAATGCATCACTCACCACAATCAGTGAGATCATTTANACTTCACCACTACATTTCATACAACCATGTATGGTTAACACAGGCACNGGGACTCCATTCATTNCAGCTATAGAATTGAGGACTTTGAGCAATAATACCTATGACACAAACTCAGCTAAATCAATATTATTGCGCCTCCGACGATTTGATTTAGGTTCCATCACCAACTTAGAATACAGGTACAAAGATGATATTTATGACCGCATCTGGTTGCCTCTTGGATTCAAAGATTGGAGACAATTAAGCACATCACTTAGCCCTGATGATCTAGCTCAGAACTATTATGAACCACCAGTAGTTGTCATGAGCACTGCTGCTACACCAACAAATACCAGTGCCCCTCTTCAGTTCTATTGGGATTCGGATGATGTGAAGGACCAATACTACATCTACATGCACTTCAATGAGGTTGAAAAGCTCACAACAAATGAAACTAGAGCATTCAATATCACCGTGAATGGCAAGTTTTGGTATGATGGACCTATGATACCTGAATACAAGATAACAAGTACCCTATTTAGTCCATCAGCTTTGACTGGAGCCACAAGGTATCTATTTTCACTTTTTAAGACAGAGACTTCTACCCTTCCACCTATCCTCAATGCCTTTGAGATTTATATAGTAAAAGACTTCTCACAATCAGAAACTGNACAAGATGATGTTGATGCTATCACAAACATCAAGAACACTTATGGGGTGCATAGAAATTGGCAAGGAGATCCATGTGCCCCTGTAGCATACATGTGGGAAGGCCTAAACTGTAGTTTTGATGGTGACAACTCCCCAAGAATCACATCCTTGGATTTATCAAACAATAGCTTAAGCGGTCCCCTACCTGATTTCCTGACCCAACTGCAGTCACTAAAAGTCCTAAACTTGGGGAAGAATAACCTTACTGGTTTAGTTCCAAGTGGACTCCTTGACAGATCAAAGAAAGGTTCACTATCATTGAGCATGGAGCAAAACCCAAATCTATGTGAATCTGCTTCATGCAACCAACAGACAGGTGATCAGAAAAAGAAGAAGAAAAATAATACAGTTATTCCCATAATAGCATCAATTGCTGGGATTTTGGTGCTCCTAGTAATCACAGCAGCAGCTATCATCTGTGGCCTTAAAANAAGAAAAACACAAGCTGCTGTGAGCAGTCATGTGGAGTTCAACACTCCAAATGGGTCACAGTTGGAATCCAAGCAAAGACAATATACATACAGTGATCTTGCCATGATCACCAACAGCTTTGATAGAATTCTTGGTAGAGGTGGATTTGGAACAGTTTATCATGGCCTTATTGATGACATTCGAGTAGCTGTCAAGATGCTTTCTGCATCATCAGTACAAGGATATCAACAATTTCTAGCAGAGGCAAGAAAAAAAAAGTTTCTGTCCAACCAAAGTTGTGGTTATCATGACATAAAAGTGGCCTTTGAATTGCAGGTTAAACTTCTGATGAGAGTCCATCACAAAAACCTCACTTCTCTTATTGGGTATTGCAATGAAGAAAACAACATAGGGCTCATTTATGAATATATGGCAAATGGAAACCTGGATGAACTACTTTCAGGAAAAAATAGCAAGGCAAGGTTCTTGACTTGGGAAGACAGACTCAAAATAGCATTGGATTCAGCCCAAGGACTGGAATATCTGCACAATGGTTGTAAGCCACCTATAATCCATAGAGATGTGAAAAGTACAAATATTTTATTAAATGAAAACTTCCAAGCAAAATTGGCTGATTTTGGCTTATCCAAAAATTTCCCCACTGATGGAGGCTCACATTTGTCCACTGTTGTTGCTGGAACTCCCGGTTACCTGGATCCTGACTTTGGAGTTGTTGTTTTGGAGATAATCACAAGTCAACCAGCTATAATAAGAACACCAGACAAGACTCACATAAGCCAGTGGGTCAGCTCCATGCTTTCCAATGGAGATATAAAAAACATTGTTGACTCAAGATTGCATGAAGACTTCGACACCAGCTCTGTCTGGAAAGCTGTTGAAATAGGAATGGCCTCTGTGTCCACTAATCCTTCCAGAAGGCCAAACATGAGTGATGTAGTGAACGAGCTCAAGGAGTGTCTGGCTACAGAATTAGCTCGAAAAAGGGCTGCTCGTGGTGACACTGATTCCATTGAGTTGGTCACCCTCAATCTCACAACTGAACTTGGTCCCATAGCT

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00021	89160	93487	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.1.5

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function GO:0004672 protein kinase activity GO:0005515 protein binding GO:0005524 ATP binding GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000021s00002694.1	PF12819.2	Malectin_like	28	340	7.80E-86
Glyur000021s00002694.1	PF13855.1	LRR_8	396	438	1.10E-06
Glyur000021s00002694.1	PF00069.20	Pkinase	549	742	5.10E-32

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.612
SRR1783600	control	0.608
SRR1783602	moderate drought stress	0.155
SRR1811619	moderate drought stress	0.131

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.207
DRR006520	Root Summer glycyrrhizin high producing strain	0.188
DRR006521	Root Winter glycyrrhizin high producing strain	0.028
DRR006522	Root Winter glycyrrhizin high producing strain	0.038
DRR006523	Root Summer glycyrrhizin low producing strain	0.128
DRR006524	Root Summer glycyrrhizin low producing strain	0.128
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.000
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.000

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	4.515
SRR2868004	Drought Stress(Tissue:root)	5.876
SRR2967015	Control (Tissue:root)	4.847

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	1.751
SRR9715740	Leave	2.920
SRR9715741	Leave	0.339
SRR9715739	Root	0.253
SRR9715742	Root	0.048
SRR9715743	Root	0.215

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.449
SRR8749028	MeJA induced 9h	1.653
SRR8749029	MeJA induced 9h	1.005
SRR8749030	Uninduced	0.517
SRR8749031	Uninduced	0.129
SRR8749032	Uninduced	0.043

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	0.334
SRR8400027	Control-Root	0.379