Gene detail information of Glyur000021s00002698.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G21330.1 | 5.00E-52 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| NR | XP_003529743.1 | 0 | PREDICTED: transcription factor bHLH87-like isoform X1 [Glycine max] |
| Swissprot | tr|Q8S3D2|BH087_ARATH | 8.00E-73 | Transcription factor bHLH87 |
| trEMBL | tr|K7KZ03|K7KZ03_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G01611.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00021 | 106959 | 108643 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | bHLH |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000021s00002698.1 | PF00010.21 | HLH | 369 | 409 | 5.50E-05 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.101 |
| SRR1783600 | control | 0.120 |
| SRR1783602 | moderate drought stress | 0.312 |
| SRR1811619 | moderate drought stress | 0.391 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.067 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.208 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.045 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.019 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.041 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.064 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.081 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.021 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 2.266 |
| SRR2868004 | Drought Stress(Tissue:root) | 1.858 |
| SRR2967015 | Control (Tissue:root) | 2.568 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 5.077 |
| SRR9715740 | Leave | 3.664 |
| SRR9715741 | Leave | 5.697 |
| SRR9715739 | Root | 1.939 |
| SRR9715742 | Root | 3.741 |
| SRR9715743 | Root | 3.096 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.624 |
| SRR8749028 | MeJA induced 9h | 3.290 |
| SRR8749029 | MeJA induced 9h | 3.340 |
| SRR8749030 | Uninduced | 3.797 |
| SRR8749031 | Uninduced | 3.022 |
| SRR8749032 | Uninduced | 1.953 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.587 |
| SRR8400027 | Control-Root | 0.892 |