Gene detail information of Glyur000021s00002710.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G51720.10Amino acid dehydrogenase family protein
NRXP_003531631.10PREDICTED: NADP-specific glutamate dehydrogenase-like isoform X1 [Glycine max]
COGYP_006762900.14.00E-149NAD(P)-specific glutamate dehydrogenase GdhA3 [Desulfobacula toluolica Tol2]
Swissprottr|P28998|DHE4_CHLSO2.00E-133NADP-specific glutamate dehydrogenase (Fragment)
trEMBLtr|I1KUX4|I1KUX4_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G20930.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00021164740175549-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00262E1.4.1.4, gdhA EC:1.4.1.4 Nitrogen metabolism map00910
Alanine, aspartate and glutamate metabolismmap00250
Arginine biosynthesismap00220


Gene Ontology

biological_process

GO:0006520  cellular amino acid metabolic process

GO:0055114  oxidation-reduction process


molecular_function

GO:0016491  oxidoreductase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000021s00002710.1PF02812.13ELFV_dehydrog_N2393683.00E-48
Glyur000021s00002710.1PF00208.16ELFV_dehydrog3856323.30E-61


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control23.828
SRR1783600control23.729
SRR1783602moderate drought stress24.163
SRR1811619moderate drought stress23.811

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain34.835
DRR006520Root Summer glycyrrhizin high producing strain34.500
DRR006521Root Winter glycyrrhizin high producing strain23.833
DRR006522Root Winter glycyrrhizin high producing strain23.360
DRR006523Root Summer glycyrrhizin low producing strain29.619
DRR006524Root Summer glycyrrhizin low producing strain29.633
DRR006525Leaf Summer glycyrrhizin high producing strain12.980
DRR006526Leaf Summer glycyrrhizin high producing strain12.889

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)43.890
SRR2868004Drought Stress(Tissue:root)44.315
SRR2967015Control (Tissue:root)45.776

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave22.349
SRR9715740Leave26.750
SRR9715741Leave30.676
SRR9715739Root7.660
SRR9715742Root30.092
SRR9715743Root27.189

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h21.574
SRR8749028MeJA induced 9h24.775
SRR8749029MeJA induced 9h13.857
SRR8749030Uninduced17.826
SRR8749031Uninduced9.058
SRR8749032Uninduced12.223

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root46.528
SRR8400027Control-Root44.704

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved