Gene detail information of Glyur000021s00002719.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G17710.1 | 9.00E-107 | Pyridoxal phosphate phosphatase-related protein |
| NR | XP_003529939.1 | 0 | PREDICTED: inorganic pyrophosphatase 2-like [Glycine max] |
| Swissprot | tr|Q9FZ62|PPSP2_ARATH | 2.00E-133 | Inorganic pyrophosphatase 2 |
| trEMBL | tr|I1KGE6|I1KGE6_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G01410.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00021 | 266487 | 268573 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K13248 | PHOSPHO2 | EC:3.1.3.74 | Vitamin B6 metabolism | map00750 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000021s00002719.1 | PF06888.7 | Put_Phosphatase | 4 | 235 | 1.50E-97 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 18.453 |
| SRR1783600 | control | 18.511 |
| SRR1783602 | moderate drought stress | 15.922 |
| SRR1811619 | moderate drought stress | 15.946 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 19.898 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 19.805 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.817 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.211 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 16.854 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 16.201 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.228 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.618 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 121.870 |
| SRR2868004 | Drought Stress(Tissue:root) | 118.913 |
| SRR2967015 | Control (Tissue:root) | 77.437 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 10.939 |
| SRR9715740 | Leave | 7.888 |
| SRR9715741 | Leave | 12.732 |
| SRR9715739 | Root | 4.551 |
| SRR9715742 | Root | 11.933 |
| SRR9715743 | Root | 10.559 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.094 |
| SRR8749028 | MeJA induced 9h | 31.510 |
| SRR8749029 | MeJA induced 9h | 62.070 |
| SRR8749030 | Uninduced | 5.207 |
| SRR8749031 | Uninduced | 15.522 |
| SRR8749032 | Uninduced | 14.656 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 63.699 |
| SRR8400027 | Control-Root | 130.699 |