Gene detail information of Glyur000021s00002731.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G13730.12.00E-176cytochrome P450, family 90, subfamily D, polypeptide 1
NRKEH18338.10cytochrome P450 family 90 protein [Medicago truncatula]
COGYP_001519436.12.00E-56cytochrome P450 family protein [Acaryochloris marina MBIC11017]
Swissprottr|Q94IA6|C90D1_ARATH03-epi-6-deoxocathasterone 23-monooxygenase
trEMBLtr|A0A072TNC8|A0A072TNC8_MEDTR0Cytochrome P450 family 90 protein {ECO:0000313|EMBL:KEH18338.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00021362793367048-


Gene family

Gene familysubfamily
Cytochrome P450 FamilyCYP90C1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K12638CYP90D1 EC:1.14.13.112 Brassinosteroid biosynthesis map00905


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0005506  iron ion binding

GO:0016705  oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000021s00002731.2PF00067.17p450371638.90E-06


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control17.065
SRR1783600control16.713
SRR1783602moderate drought stress15.941
SRR1811619moderate drought stress15.018

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain14.770
DRR006520Root Summer glycyrrhizin high producing strain10.793
DRR006521Root Winter glycyrrhizin high producing strain0.517
DRR006522Root Winter glycyrrhizin high producing strain0.512
DRR006523Root Summer glycyrrhizin low producing strain9.437
DRR006524Root Summer glycyrrhizin low producing strain9.913
DRR006525Leaf Summer glycyrrhizin high producing strain0.043
DRR006526Leaf Summer glycyrrhizin high producing strain0.020

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)5.227
SRR2868004Drought Stress(Tissue:root)3.512
SRR2967015Control (Tissue:root)4.382

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.031
SRR9715740Leave0.059
SRR9715741Leave0.014
SRR9715739Root2.924
SRR9715742Root6.959
SRR9715743Root5.227

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.066
SRR8749028MeJA induced 9h0.032
SRR8749029MeJA induced 9h0.084
SRR8749030Uninduced0.120
SRR8749031Uninduced0.004
SRR8749032Uninduced0.026

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root9.542
SRR8400027Control-Root6.280

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved