Gene detail information of Glyur000021s00002742.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G72970.10Glucose-methanol-choline (GMC) oxidoreductase family protein
NRXP_004509975.10PREDICTED: probable disease resistance protein At4g27220-like isoform X1 [Cicer arietinum]
COGYP_007093192.17.00E-37glucose-methanol-choline oxidoreductase [Chroococcidiopsis thermalis PCC 7203]
Swissprottr|Q9S746|HTH_ARATH0Protein HOTHEAD (Precursor)
trEMBLtr|A0A067XTH1|A0A067XTH1_CICAR0CC-NBS-LRR disease resistance protein {ECO:0000313|EMBL:AGT75405.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00021438120452501+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K15403ACE, HTH EC:1.1.-.- Cutin, suberine and wax biosynthesis map00073


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0016614  oxidoreductase activity, acting on CH-OH group of donors

GO:0043531  ADP binding

GO:0050660  flavin adenine dinucleotide binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000021s00002742.1PF00732.14GMC_oxred_N633356.90E-31
Glyur000021s00002742.1PF05199.8GMC_oxred_C4335779.70E-28
Glyur000021s00002742.1PF00931.17NB-ARC79110589.70E-51


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.787
SRR1783600control0.748
SRR1783602moderate drought stress1.034
SRR1811619moderate drought stress1.059

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.488
DRR006520Root Summer glycyrrhizin high producing strain0.521
DRR006521Root Winter glycyrrhizin high producing strain0.093
DRR006522Root Winter glycyrrhizin high producing strain0.047
DRR006523Root Summer glycyrrhizin low producing strain0.346
DRR006524Root Summer glycyrrhizin low producing strain0.322
DRR006525Leaf Summer glycyrrhizin high producing strain0.664
DRR006526Leaf Summer glycyrrhizin high producing strain0.629

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)4.873
SRR2868004Drought Stress(Tissue:root)6.162
SRR2967015Control (Tissue:root)5.456

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.788
SRR9715740Leave0.654
SRR9715741Leave0.694
SRR9715739Root0.087
SRR9715742Root0.604
SRR9715743Root0.662

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.250
SRR8749028MeJA induced 9h1.592
SRR8749029MeJA induced 9h0.194
SRR8749030Uninduced1.192
SRR8749031Uninduced0.464
SRR8749032Uninduced0.180

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root3.386
SRR8400027Control-Root3.477

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved