Gene detail information of Glyur000021s00002751.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G13850.1 | 3.00E-42 | LOB domain-containing protein 22 |
| NR | XP_004510487.1 | 1.71E-120 | PREDICTED: LOB domain-containing protein 22-like [Cicer arietinum] |
| Swissprot | tr|Q9LRW1|LBD22_ARATH | 3.00E-57 | LOB domain-containing protein 22 |
| trEMBL | tr|G7LHF8|G7LHF8_MEDTR | 2.00E-109 | LOB domain protein {ECO:0000313|EMBL:AET01574.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00021 | 501941 | 503462 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | LOB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000021s00002751.1 | PF03195.9 | DUF260 | 31 | 130 | 5.40E-37 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.090 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.117 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.305 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.162 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.482 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.180 |
| SRR2967015 | Control (Tissue:root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.004 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.044 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.129 |
| SRR8749029 | MeJA induced 9h | 0.073 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.044 |
| SRR8749032 | Uninduced | 0.062 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.055 |
| SRR8400027 | Control-Root | 0.000 |