Gene detail information of Glyur000022s00001965.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G24740.10FUS3-complementing gene 2
NRXP_007155494.10hypothetical protein PHAVU_003G206200g [Phaseolus vulgaris]
COGYP_008147087.13.00E-16hypothetical protein SCE1572_03120 [Sorangium cellulosum So0157-2]
Swissprottr|P51567|AFC2_ARATH0Serine/threonine-protein kinase AFC2
trEMBLtr|V7CDP1|V7CDP1_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW27488.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold000221977523790+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.5.6


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000022s00001965.1PF00069.20Pkinase984233.20E-56


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control74.897
SRR1783600control75.857
SRR1783602moderate drought stress81.550
SRR1811619moderate drought stress79.303

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain90.572
DRR006520Root Summer glycyrrhizin high producing strain89.214
DRR006521Root Winter glycyrrhizin high producing strain89.763
DRR006522Root Winter glycyrrhizin high producing strain86.238
DRR006523Root Summer glycyrrhizin low producing strain99.998
DRR006524Root Summer glycyrrhizin low producing strain100.347
DRR006525Leaf Summer glycyrrhizin high producing strain54.340
DRR006526Leaf Summer glycyrrhizin high producing strain53.296

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)159.697
SRR2868004Drought Stress(Tissue:root)194.236
SRR2967015Control (Tissue:root)182.977

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave81.394
SRR9715740Leave105.636
SRR9715741Leave107.979
SRR9715739Root33.171
SRR9715742Root52.262
SRR9715743Root46.416

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h71.677
SRR8749028MeJA induced 9h103.856
SRR8749029MeJA induced 9h74.969
SRR8749030Uninduced86.319
SRR8749031Uninduced108.763
SRR8749032Uninduced102.172

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root164.934
SRR8400027Control-Root151.475

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved