Gene detail information of Glyur000022s00002023.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G54590.24.00E-76Protein kinase superfamily protein
NRNP_001239745.19.88E-124probable leucine-rich repeat receptor-like serine/threonine-protein kinase At5g15730-like [Glycine max]
COGYP_007094710.11.00E-18serine/threonine protein kinase [Chroococcidiopsis thermalis PCC 7203]
Swissprottr|Q9LFV3|Y5157_ARATH7.00E-51Probable leucine-rich repeat receptor-like serine/threonine-protein kinase At5g15730
trEMBLtr|C6ZRS6|C6ZRS6_SOYBN4.00E-124Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G41510.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00022310314314565-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.3.3


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0004713  protein tyrosine kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000022s00002023.2PF07714.12Pkinase_Tyr1592707.10E-23


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control8.319
SRR1783600control8.356
SRR1783602moderate drought stress7.165
SRR1811619moderate drought stress7.017

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain7.976
DRR006520Root Summer glycyrrhizin high producing strain7.907
DRR006521Root Winter glycyrrhizin high producing strain0.125
DRR006522Root Winter glycyrrhizin high producing strain0.122
DRR006523Root Summer glycyrrhizin low producing strain2.956
DRR006524Root Summer glycyrrhizin low producing strain2.859
DRR006525Leaf Summer glycyrrhizin high producing strain1.721
DRR006526Leaf Summer glycyrrhizin high producing strain1.696

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)10.823
SRR2868004Drought Stress(Tissue:root)8.992
SRR2967015Control (Tissue:root)15.210

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.703
SRR9715740Leave0.051
SRR9715741Leave0.178
SRR9715739Root3.709
SRR9715742Root3.828
SRR9715743Root4.288

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h10.758
SRR8749028MeJA induced 9h16.522
SRR8749029MeJA induced 9h18.897
SRR8749030Uninduced29.049
SRR8749031Uninduced32.566
SRR8749032Uninduced13.949

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root22.116
SRR8400027Control-Root22.185

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved