Gene detail information of Glyur000022s00002024.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G48150.2 | 6.00E-141 | GRAS family transcription factor |
| NR | XP_003526176.1 | 0 | PREDICTED: chitin-inducible gibberellin-responsive protein 1-like isoform X1 [Glycine max] |
| Swissprot | tr|Q69VG1|CIGR1_ORYSJ | 0 | Chitin-inducible gibberellin-responsive protein 1 |
| trEMBL | tr|I1KEE1|I1KEE1_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G41500.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00022 | 319984 | 321606 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | GRAS |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000022s00002024.1 | PF03514.9 | GRAS | 170 | 539 | 2.50E-123 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.188 |
| SRR1783600 | control | 0.158 |
| SRR1783602 | moderate drought stress | 0.746 |
| SRR1811619 | moderate drought stress | 0.659 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.322 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.163 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.272 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.292 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.114 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.114 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 1.481 |
| SRR2868004 | Drought Stress(Tissue:root) | 3.260 |
| SRR2967015 | Control (Tissue:root) | 1.778 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.377 |
| SRR9715740 | Leave | 0.020 |
| SRR9715741 | Leave | 0.805 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.102 |
| SRR9715743 | Root | 0.209 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.239 |
| SRR8749028 | MeJA induced 9h | 8.780 |
| SRR8749029 | MeJA induced 9h | 12.512 |
| SRR8749030 | Uninduced | 10.891 |
| SRR8749031 | Uninduced | 32.258 |
| SRR8749032 | Uninduced | 29.812 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 1.305 |
| SRR8400027 | Control-Root | 1.652 |