Gene detail information of Glyur000022s00002027.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G32180.3 | 4.00E-15 | pantothenate kinase 2 |
| NR | KHN48232.1 | 1.48E-18 | Pantothenate kinase 2 [Glycine soja] |
| Swissprot | tr|Q8L5Y9|PANK2_ARATH | 3.00E-16 | Pantothenate kinase 2 |
| trEMBL | tr|I1LZB2|I1LZB2_SOYBN | 6.00E-19 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G21030.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00022 | 328495 | 331453 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K09680 | coaW | EC:2.7.1.33 | Pantothenate and CoA biosynthesis | map00770 |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.083 |
| SRR1783600 | control | 0.024 |
| SRR1783602 | moderate drought stress | 4.717 |
| SRR1811619 | moderate drought stress | 5.238 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.306 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.118 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.068 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.587 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.076 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.226 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.228 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.010 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.021 |
| SRR2967015 | Control (Tissue:root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 1.139 |
| SRR9715740 | Leave | 1.777 |
| SRR9715741 | Leave | 1.160 |
| SRR9715739 | Root | 1.082 |
| SRR9715742 | Root | 1.065 |
| SRR9715743 | Root | 1.352 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 6.096 |
| SRR8400027 | Control-Root | 5.806 |