Gene detail information of Glyur000022s00002041.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G20650.23.00E-162mRNA capping enzyme family protein
NRXP_003531699.10PREDICTED: mRNA cap guanine-N7 methyltransferase 1-like isoform X1 [Glycine max]
Swissprottr|Q9LHQ7|MCES1_ARATH0mRNA cap guanine-N7 methyltransferase 1
trEMBLtr|K7L7W0|K7L7W0_SOYBN0mRNA cap guanine-N7 methyltransferase {ECO:0000256|PIRNR:PIRNR028762}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00022375573380964+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00565RNMT EC:2.1.1.56 mRNA surveillance pathway map03015


Gene Ontology

Not hits found.


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000022s00002041.1PF03291.11Pox_MCEL332121.70E-65
Glyur000022s00002041.1PF03291.11Pox_MCEL2133119.00E-22


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control18.662
SRR1783600control18.583
SRR1783602moderate drought stress16.388
SRR1811619moderate drought stress16.258

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain25.156
DRR006520Root Summer glycyrrhizin high producing strain25.381
DRR006521Root Winter glycyrrhizin high producing strain62.255
DRR006522Root Winter glycyrrhizin high producing strain60.571
DRR006523Root Summer glycyrrhizin low producing strain24.398
DRR006524Root Summer glycyrrhizin low producing strain24.924
DRR006525Leaf Summer glycyrrhizin high producing strain16.134
DRR006526Leaf Summer glycyrrhizin high producing strain15.952

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)30.356
SRR2868004Drought Stress(Tissue:root)32.200
SRR2967015Control (Tissue:root)32.094

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave16.306
SRR9715740Leave17.646
SRR9715741Leave17.968
SRR9715739Root3.077
SRR9715742Root11.805
SRR9715743Root11.107

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h39.929
SRR8749028MeJA induced 9h31.740
SRR8749029MeJA induced 9h62.311
SRR8749030Uninduced46.083
SRR8749031Uninduced46.463
SRR8749032Uninduced45.659

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root21.994
SRR8400027Control-Root22.285

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved