Gene detail information of Glyur000022s00002046.2 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G69580.1 | 3.00E-67 | Homeodomain-like superfamily protein |
| NR | XP_004505417.1 | 0 | PREDICTED: protein PHR1-LIKE 1-like [Cicer arietinum] |
| Swissprot | tr|Q9SAK5|APL_ARATH | 7.00E-49 | Myb family transcription factor APL |
| trEMBL | tr|V7CMT0|V7CMT0_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW30643.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00022 | 411176 | 416181 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | G2-like |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000022s00002046.2 | PF00249.26 | Myb_DNA-binding | 22 | 73 | 3.70E-16 |
| Glyur000022s00002046.2 | PF14379.1 | Myb_CC_LHEQLE | 116 | 164 | 8.30E-18 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.677 |
| SRR1783600 | control | 8.576 |
| SRR1783602 | moderate drought stress | 7.676 |
| SRR1811619 | moderate drought stress | 7.840 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.287 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.355 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.007 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.487 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.938 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.426 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 12.369 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 12.224 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 30.615 |
| SRR2868004 | Drought Stress(Tissue:root) | 34.363 |
| SRR2967015 | Control (Tissue:root) | 36.251 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 18.222 |
| SRR9715740 | Leave | 27.044 |
| SRR9715741 | Leave | 13.713 |
| SRR9715739 | Root | 0.469 |
| SRR9715742 | Root | 6.862 |
| SRR9715743 | Root | 4.515 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.057 |
| SRR8749028 | MeJA induced 9h | 0.493 |
| SRR8749029 | MeJA induced 9h | 1.509 |
| SRR8749030 | Uninduced | 0.256 |
| SRR8749031 | Uninduced | 0.642 |
| SRR8749032 | Uninduced | 1.156 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 39.808 |
| SRR8400027 | Control-Root | 35.283 |