Gene detail information of Glyur000022s00002054.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G69560.1 | 7.00E-60 | myb domain protein 105 |
| NR | XP_007158647.1 | 0 | hypothetical protein PHAVU_002G170500g [Phaseolus vulgaris] |
| Swissprot | tr|Q9FDW1|MYB44_ARATH | 8.00E-36 | Transcription factor MYB44 |
| trEMBL | tr|V7CP20|V7CP20_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW30641.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00022 | 445033 | 446977 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000022s00002054.1 | PF13921.1 | Myb_DNA-bind_6 | 156 | 216 | 4.90E-16 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.316 |
| SRR1783600 | control | 0.335 |
| SRR1783602 | moderate drought stress | 0.831 |
| SRR1811619 | moderate drought stress | 0.818 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.185 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.139 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.089 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.227 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.614 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.610 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.089 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.129 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.089 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.069 |
| SRR2967015 | Control (Tissue:root) | 0.036 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.049 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.169 |
| SRR9715742 | Root | 0.472 |
| SRR9715743 | Root | 0.856 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.537 |
| SRR8749028 | MeJA induced 9h | 0.740 |
| SRR8749029 | MeJA induced 9h | 1.511 |
| SRR8749030 | Uninduced | 0.045 |
| SRR8749031 | Uninduced | 0.054 |
| SRR8749032 | Uninduced | 0.107 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.138 |
| SRR8400027 | Control-Root | 0.155 |