Gene detail information of Glyur000022s00002074.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G14000.10VH1-interacting kinase
NRKEH30795.10dual specificity kinase splA-like protein [Medicago truncatula]
COGYP_004904659.16.00E-30putative serine/threonine protein kinase [Kitasatospora setae KM-6054]
Swissprottr|Q2MHE4|HT1_ARATH2.00E-46Serine/threonine-protein kinase HT1
trEMBLtr|A0A072UY58|A0A072UY58_MEDTR0Dual specificity kinase splA-like protein {ECO:0000313|EMBL:KEH30795.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00022545927551317-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:2.1.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation

GO:0009966  regulation of signal transduction


molecular_function

GO:0004672  protein kinase activity

GO:0004674  protein serine/threonine kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000022s00002074.1PF12796.2Ank_2281105.20E-13
Glyur000022s00002074.1PF00069.20Pkinase1483973.80E-64


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control34.285
SRR1783600control35.117
SRR1783602moderate drought stress25.060
SRR1811619moderate drought stress25.403

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain77.324
DRR006520Root Summer glycyrrhizin high producing strain76.160
DRR006521Root Winter glycyrrhizin high producing strain53.759
DRR006522Root Winter glycyrrhizin high producing strain52.443
DRR006523Root Summer glycyrrhizin low producing strain110.790
DRR006524Root Summer glycyrrhizin low producing strain111.644
DRR006525Leaf Summer glycyrrhizin high producing strain28.277
DRR006526Leaf Summer glycyrrhizin high producing strain28.372

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)47.223
SRR2868004Drought Stress(Tissue:root)54.109
SRR2967015Control (Tissue:root)45.476

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave58.784
SRR9715740Leave40.837
SRR9715741Leave67.689
SRR9715739Root41.701
SRR9715742Root101.626
SRR9715743Root89.385

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h51.973
SRR8749028MeJA induced 9h52.869
SRR8749029MeJA induced 9h56.572
SRR8749030Uninduced69.417
SRR8749031Uninduced55.493
SRR8749032Uninduced43.834

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root40.748
SRR8400027Control-Root57.697

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved