Gene detail information of Glyur000023s00004874.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G40270.12.00E-121Protein kinase family protein
NRXP_003544063.10PREDICTED: probable LRR receptor-like serine/threonine-protein kinase MRH1-like [Glycine max]
COGYP_007319008.17.00E-10hypothetical protein FAES_0403 [Fibrella aestuarina BUZ 2]
Swissprottr|C0LGQ4|MRH1_ARATH5.00E-169Probable LRR receptor-like serine/threonine-protein kinase MRH1 (Precursor)
trEMBLtr|I1M7R5|I1M7R5_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G06230.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold000235456459070+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.15.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000023s00004874.1PF08263.7LRRNT_235782.60E-12
Glyur000023s00004874.1PF07714.12Pkinase_Tyr3716332.70E-23


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control7.187
SRR1783600control7.238
SRR1783602moderate drought stress8.381
SRR1811619moderate drought stress8.397

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain11.408
DRR006520Root Summer glycyrrhizin high producing strain11.283
DRR006521Root Winter glycyrrhizin high producing strain2.687
DRR006522Root Winter glycyrrhizin high producing strain2.720
DRR006523Root Summer glycyrrhizin low producing strain16.914
DRR006524Root Summer glycyrrhizin low producing strain16.905
DRR006525Leaf Summer glycyrrhizin high producing strain85.870
DRR006526Leaf Summer glycyrrhizin high producing strain85.131

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)10.523
SRR2868004Drought Stress(Tissue:root)16.336
SRR2967015Control (Tissue:root)13.287

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave62.494
SRR9715740Leave82.389
SRR9715741Leave66.794
SRR9715739Root3.183
SRR9715742Root16.729
SRR9715743Root13.127

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h6.584
SRR8749028MeJA induced 9h6.479
SRR8749029MeJA induced 9h4.566
SRR8749030Uninduced3.358
SRR8749031Uninduced1.615
SRR8749032Uninduced1.531

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root8.891
SRR8400027Control-Root10.036

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved