Gene detail information of Glyur000023s00004890.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G37260.1 | 2.00E-43 | myb domain protein 73 |
| NR | XP_004491024.1 | 4.09E-100 | PREDICTED: transcription factor MYB44-like [Cicer arietinum] |
| Swissprot | tr|Q9FDW1|MYB44_ARATH | 9.00E-52 | Transcription factor MYB44 |
| trEMBL | tr|K7M548|K7M548_SOYBN | 4.00E-83 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G06320.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00023 | 137874 | 138707 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000023s00004890.1 | PF00249.26 | Myb_DNA-binding | 19 | 64 | 1.80E-15 |
| Glyur000023s00004890.1 | PF00249.26 | Myb_DNA-binding | 73 | 115 | 8.20E-15 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.348 |
| SRR1783600 | control | 1.488 |
| SRR1783602 | moderate drought stress | 3.541 |
| SRR1811619 | moderate drought stress | 3.804 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.904 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 12.257 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 27.793 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 26.262 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 13.952 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 14.307 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.760 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.739 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 1.413 |
| SRR2868004 | Drought Stress(Tissue:root) | 1.033 |
| SRR2967015 | Control (Tissue:root) | 1.649 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 1.833 |
| SRR9715740 | Leave | 3.324 |
| SRR9715741 | Leave | 6.588 |
| SRR9715739 | Root | 0.597 |
| SRR9715742 | Root | 1.034 |
| SRR9715743 | Root | 1.397 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 1.721 |
| SRR8400027 | Control-Root | 2.007 |