Gene detail information of Glyur000023s00004905.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G40120.13.00E-170Protein kinase superfamily protein
NRKHN20842.10Dual specificity protein kinase pom1 [Glycine soja]
COGYP_005366773.11.00E-19serine/threonine protein kinase [Corallococcus coralloides DSM 2259]
Swissprottr|P51567|AFC2_ARATH3.00E-45Serine/threonine-protein kinase AFC2
trEMBLtr|I1M7T1|I1M7T1_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G06420.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00023248059252806+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.5.8


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000023s00004905.1PF00069.20Pkinase4107102.80E-51


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control8.574
SRR1783600control8.755
SRR1783602moderate drought stress8.882
SRR1811619moderate drought stress8.574

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain24.804
DRR006520Root Summer glycyrrhizin high producing strain24.754
DRR006521Root Winter glycyrrhizin high producing strain25.495
DRR006522Root Winter glycyrrhizin high producing strain25.083
DRR006523Root Summer glycyrrhizin low producing strain22.336
DRR006524Root Summer glycyrrhizin low producing strain22.379
DRR006525Leaf Summer glycyrrhizin high producing strain8.724
DRR006526Leaf Summer glycyrrhizin high producing strain8.766

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)27.435
SRR2868004Drought Stress(Tissue:root)28.335
SRR2967015Control (Tissue:root)25.444

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave19.275
SRR9715740Leave20.957
SRR9715741Leave25.181
SRR9715739Root3.218
SRR9715742Root15.785
SRR9715743Root13.553

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h7.105
SRR8749028MeJA induced 9h17.056
SRR8749029MeJA induced 9h8.258
SRR8749030Uninduced21.883
SRR8749031Uninduced21.848
SRR8749032Uninduced11.782

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root32.086
SRR8400027Control-Root37.946

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved