Gene detail information of Glyur000023s00004909.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G08510.20phospholipase C 2
NRNP_001235310.10phosphoinositide-specific phospholipase C P13 [Glycine max]
Swissprottr|Q39033|PLCD2_ARATH0Phosphoinositide phospholipase C 2
trEMBLtr|Q43443|Q43443_SOYBN0Phosphoinositide phospholipase C {ECO:0000256|RuleBase:RU361133}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00023279963293827-


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K05857PLCD EC:3.1.4.11 Inositol phosphate metabolism map00562
Calcium signaling pathwaymap04020
Phosphatidylinositol signaling systemmap04070
Thyroid hormone signaling pathwaymap04919
AGE-RAGE signaling pathway in diabetic complicationsmap04933


Gene Ontology

biological_process

GO:0006629  lipid metabolic process

GO:0007165  signal transduction

GO:0035556  intracellular signal transduction


molecular_function

GO:0004435  phosphatidylinositol phospholipase C activity

GO:0005515  protein binding

GO:0008081  phosphoric diester hydrolase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000023s00004909.1PF09279.6EF-hand_like271116.20E-08
Glyur000023s00004909.1PF00388.14PI-PLC-X1162456.50E-42
Glyur000023s00004909.1PF00387.14PI-PLC-Y3313764.10E-11
Glyur000023s00004909.1PF00168.25C23984906.90E-16
Glyur000023s00004909.1PF09279.6EF-hand_like5686432.80E-19
Glyur000023s00004909.1PF00388.14PI-PLC-X6497924.90E-47
Glyur000023s00004909.1PF00387.14PI-PLC-Y8949562.20E-19
Glyur000023s00004909.1PF00168.25C297510661.40E-13


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control4.022
SRR1783600control4.226
SRR1783602moderate drought stress7.453
SRR1811619moderate drought stress7.688

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain7.213
DRR006520Root Summer glycyrrhizin high producing strain6.974
DRR006521Root Winter glycyrrhizin high producing strain2.357
DRR006522Root Winter glycyrrhizin high producing strain2.330
DRR006523Root Summer glycyrrhizin low producing strain4.526
DRR006524Root Summer glycyrrhizin low producing strain4.752
DRR006525Leaf Summer glycyrrhizin high producing strain8.756
DRR006526Leaf Summer glycyrrhizin high producing strain8.537

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)34.312
SRR2868004Drought Stress(Tissue:root)30.142
SRR2967015Control (Tissue:root)30.673

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave12.478
SRR9715740Leave11.582
SRR9715741Leave14.243
SRR9715739Root1.979
SRR9715742Root9.653
SRR9715743Root8.157

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h11.730
SRR8749028MeJA induced 9h14.402
SRR8749029MeJA induced 9h13.954
SRR8749030Uninduced9.961
SRR8749031Uninduced9.112
SRR8749032Uninduced8.495

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root39.568
SRR8400027Control-Root34.695

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved