Gene detail information of Glyur000023s00004915.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G05690.15.00E-167Cytochrome P450 superfamily protein
NRBAF56238.10cytochrome P450 enzyme [Pisum sativum]
COGYP_007123031.14.00E-47cytochrome P450 [Microcoleus sp. PCC 7113]
Swissprottr|Q42569|C90A1_ARATH0Cytochrome P450 90A1
trEMBLtr|A4PBE6|A4PBE6_PEA0Cytochrome P450 enzyme {ECO:0000313|EMBL:BAF56238.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00023313933321272-


Gene family

Gene familysubfamily
Cytochrome P450 FamilyCYP90A1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K09588CYP90A1, CPD EC:1.14.-.- Brassinosteroid biosynthesis map00905


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0005506  iron ion binding

GO:0016705  oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000023s00004915.1PF00067.17p450321333.30E-05
Glyur000023s00004915.1PF00067.17p4502082981.80E-09
Glyur000023s00004915.1PF00067.17p4503043872.50E-20


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.000
SRR1783600control0.000
SRR1783602moderate drought stress0.013
SRR1811619moderate drought stress0.000

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.414
DRR006520Root Summer glycyrrhizin high producing strain0.392
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain0.031
DRR006524Root Summer glycyrrhizin low producing strain0.068
DRR006525Leaf Summer glycyrrhizin high producing strain7.678
DRR006526Leaf Summer glycyrrhizin high producing strain7.364

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)3.463
SRR2868004Drought Stress(Tissue:root)1.927
SRR2967015Control (Tissue:root)1.734

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave5.829
SRR9715740Leave0.225
SRR9715741Leave1.079
SRR9715739Root0.000
SRR9715742Root0.029
SRR9715743Root0.081

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.408
SRR8749028MeJA induced 9h0.052
SRR8749029MeJA induced 9h0.027
SRR8749030Uninduced0.000
SRR8749031Uninduced0.002
SRR8749032Uninduced0.116

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.110
SRR8400027Control-Root0.357

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved