Gene detail information of Glyur000023s00004923.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G47570.10Leucine-rich repeat protein kinase family protein
NRXP_003616620.10Receptor-like protein kinase [Medicago truncatula]
COGYP_004775215.12.00E-54RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprottr|C0LGP4|Y3475_ARATH0Probable LRR receptor-like serine/threonine-protein kinase At3g47570 (Precursor)
trEMBLtr|G7KGZ6|G7KGZ6_MEDTR0LRR receptor-like kinase family protein {ECO:0000313|EMBL:AES99578.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00023366497384398-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000023s00004923.1PF08263.7LRRNT_240782.20E-08
Glyur000023s00004923.1PF13855.1LRR_81321912.70E-07
Glyur000023s00004923.1PF13855.1LRR_82032633.60E-08
Glyur000023s00004923.1PF13855.1LRR_84765366.10E-08
Glyur000023s00004923.1PF00560.28LRR_15735950.018
Glyur000023s00004923.1PF00069.20Pkinase7179473.80E-38
Glyur000023s00004923.1PF08263.7LRRNT_2104010781.60E-07
Glyur000023s00004923.1PF13855.1LRR_8113211911.20E-06
Glyur000023s00004923.1PF13855.1LRR_8120312632.90E-07
Glyur000023s00004923.1PF13855.1LRR_8147715363.80E-07
Glyur000023s00004923.1PF00560.28LRR_1157315950.079
Glyur000023s00004923.1PF00069.20Pkinase171719042.90E-28
Glyur000023s00004923.1PF08263.7LRRNT_2197620137.80E-08
Glyur000023s00004923.1PF00560.28LRR_1206820890.53
Glyur000023s00004923.1PF13855.1LRR_8241124711.90E-07
Glyur000023s00004923.1PF00560.28LRR_1250825300.04
Glyur000023s00004923.1PF00069.20Pkinase265228682.50E-40


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.163
SRR1783600control0.160
SRR1783602moderate drought stress0.907
SRR1811619moderate drought stress0.867

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain6.025
DRR006520Root Summer glycyrrhizin high producing strain5.891
DRR006521Root Winter glycyrrhizin high producing strain0.212
DRR006522Root Winter glycyrrhizin high producing strain0.196
DRR006523Root Summer glycyrrhizin low producing strain0.322
DRR006524Root Summer glycyrrhizin low producing strain0.383
DRR006525Leaf Summer glycyrrhizin high producing strain2.070
DRR006526Leaf Summer glycyrrhizin high producing strain2.082

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.110
SRR2868004Drought Stress(Tissue:root)0.119
SRR2967015Control (Tissue:root)0.650

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave3.114
SRR9715740Leave5.883
SRR9715741Leave4.576
SRR9715739Root1.929
SRR9715742Root6.719
SRR9715743Root6.367

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.137
SRR8749028MeJA induced 9h0.086
SRR8749029MeJA induced 9h0.155
SRR8749030Uninduced0.062
SRR8749031Uninduced0.080
SRR8749032Uninduced0.120

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.093
SRR8400027Control-Root0.238

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved