Gene detail information of Glyur000023s00004926.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G47570.11.00E-171Leucine-rich repeat protein kinase family protein
NRXP_007141779.10hypothetical protein PHAVU_008G225000g [Phaseolus vulgaris]
COGYP_004775215.13.00E-53RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprottr|C0LGP4|Y3475_ARATH0Probable LRR receptor-like serine/threonine-protein kinase At3g47570 (Precursor)
trEMBLtr|V7BA90|V7BA90_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW13773.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00023402723409661-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000023s00004926.1PF07714.12Pkinase_Tyr442041.10E-28
Glyur000023s00004926.1PF13855.1LRR_82933521.80E-06
Glyur000023s00004926.1PF13855.1LRR_86376971.90E-09
Glyur000023s00004926.1PF00560.28LRR_17347560.04
Glyur000023s00004926.1PF07714.12Pkinase_Tyr8118949.30E-09
Glyur000023s00004926.1PF00069.20Pkinase90810743.00E-17


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.126
SRR1783600control0.148
SRR1783602moderate drought stress0.244
SRR1811619moderate drought stress0.281

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.680
DRR006520Root Summer glycyrrhizin high producing strain1.597
DRR006521Root Winter glycyrrhizin high producing strain0.032
DRR006522Root Winter glycyrrhizin high producing strain0.063
DRR006523Root Summer glycyrrhizin low producing strain0.328
DRR006524Root Summer glycyrrhizin low producing strain0.282
DRR006525Leaf Summer glycyrrhizin high producing strain0.544
DRR006526Leaf Summer glycyrrhizin high producing strain0.607

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.031
SRR2868004Drought Stress(Tissue:root)0.089
SRR2967015Control (Tissue:root)0.042

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.760
SRR9715740Leave0.286
SRR9715741Leave0.762
SRR9715739Root0.004
SRR9715742Root1.302
SRR9715743Root1.103

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.005
SRR8749028MeJA induced 9h0.053
SRR8749029MeJA induced 9h0.000
SRR8749030Uninduced0.032
SRR8749031Uninduced0.000
SRR8749032Uninduced0.012

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.055
SRR8400027Control-Root0.158

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved