Gene detail information of Glyur000023s00004927.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G47090.17.00E-74Leucine-rich repeat protein kinase family protein
NRKEH38492.11.74E-174LRR receptor-like kinase [Medicago truncatula]
COGYP_001192956.11.00E-42two component regulator [Flavobacterium johnsoniae UW101]
Swissprottr|C0LGP4|Y3475_ARATH9.00E-79Probable LRR receptor-like serine/threonine-protein kinase At3g47570 (Precursor)
trEMBLtr|A0A072V9L4|A0A072V9L4_MEDTR6.00E-175LRR receptor-like kinase {ECO:0000313|EMBL:KEH38492.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00023425166428400-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000023s00004927.1PF08263.7LRRNT_215531.80E-09
Glyur000023s00004927.1PF12799.2LRR_41061435.00E-08
Glyur000023s00004927.1PF13855.1LRR_81782382.60E-07
Glyur000023s00004927.1PF00560.28LRR_13874060.81
Glyur000023s00004927.1PF00069.20Pkinase4045802.40E-27


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.114
SRR1783600control0.147
SRR1783602moderate drought stress0.204
SRR1811619moderate drought stress0.097

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.999
DRR006520Root Summer glycyrrhizin high producing strain2.454
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain1.106
DRR006524Root Summer glycyrrhizin low producing strain1.010
DRR006525Leaf Summer glycyrrhizin high producing strain0.541
DRR006526Leaf Summer glycyrrhizin high producing strain0.555

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.280
SRR2868004Drought Stress(Tissue:root)0.588
SRR2967015Control (Tissue:root)0.642

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.415
SRR9715740Leave0.195
SRR9715741Leave0.346
SRR9715739Root0.442
SRR9715742Root5.688
SRR9715743Root3.783

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.081
SRR8749028MeJA induced 9h0.251
SRR8749029MeJA induced 9h0.342
SRR8749030Uninduced0.085
SRR8749031Uninduced0.124
SRR8749032Uninduced0.213

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.489
SRR8400027Control-Root0.453

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved