Gene detail information of Glyur000023s00004936.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G55830.1 | 3.00E-123 | Nucleotide-diphospho-sugar transferases superfamily protein |
| NR | XP_004490963.1 | 0 | PREDICTED: exostosin-2-like [Cicer arietinum] |
| Swissprot | tr|Q9LY62|GT644_ARATH | 1.00E-158 | Glycosyltransferase family 64 protein C4 {ECO:0000303|PubMed:24905498} |
| trEMBL | tr|I1JI68|I1JI68_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G42230.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00023 | 510194 | 514711 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT64 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000023s00004936.1 | PF09258.5 | Glyco_transf_64 | 73 | 326 | 6.70E-86 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 16.825 |
| SRR1783600 | control | 16.783 |
| SRR1783602 | moderate drought stress | 20.765 |
| SRR1811619 | moderate drought stress | 20.489 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 24.092 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 23.275 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 77.417 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 75.187 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 46.748 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 46.654 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.307 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.357 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 56.482 |
| SRR2868004 | Drought Stress(Tissue:root) | 77.299 |
| SRR2967015 | Control (Tissue:root) | 68.114 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 34.407 |
| SRR9715740 | Leave | 29.168 |
| SRR9715741 | Leave | 59.038 |
| SRR9715739 | Root | 22.834 |
| SRR9715742 | Root | 39.152 |
| SRR9715743 | Root | 34.800 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 36.278 |
| SRR8749028 | MeJA induced 9h | 40.230 |
| SRR8749029 | MeJA induced 9h | 48.016 |
| SRR8749030 | Uninduced | 79.050 |
| SRR8749031 | Uninduced | 136.057 |
| SRR8749032 | Uninduced | 97.725 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 45.449 |
| SRR8400027 | Control-Root | 36.513 |