Gene detail information of Glyur000024s00006621.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G06740.13.00E-162Concanavalin A-like lectin protein kinase family protein
NRXP_007145695.10hypothetical protein PHAVU_007G260500g [Phaseolus vulgaris]
COGYP_002763346.11.00E-24putative serine/threonine protein kinase [Gemmatimonas aurantiaca T-27]
Swissprottr|Q9FG33|LRKS5_ARATH0Probable L-type lectin-domain containing receptor kinase S.5 (Precursor)
trEMBLtr|V7BID6|V7BID6_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW17689.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00024316646323829+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.11.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups

GO:0030246  carbohydrate binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000024s00006621.1PF00139.14Lectin_legB31757.60E-43
Glyur000024s00006621.1PF00069.20Pkinase2555326.80E-49


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.205
SRR1783600control2.263
SRR1783602moderate drought stress2.211
SRR1811619moderate drought stress2.224

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.084
DRR006520Root Summer glycyrrhizin high producing strain2.043
DRR006521Root Winter glycyrrhizin high producing strain0.841
DRR006522Root Winter glycyrrhizin high producing strain0.856
DRR006523Root Summer glycyrrhizin low producing strain1.421
DRR006524Root Summer glycyrrhizin low producing strain1.436
DRR006525Leaf Summer glycyrrhizin high producing strain0.538
DRR006526Leaf Summer glycyrrhizin high producing strain0.519

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)4.917
SRR2868004Drought Stress(Tissue:root)7.255
SRR2967015Control (Tissue:root)6.140

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.374
SRR9715740Leave0.279
SRR9715741Leave0.471
SRR9715739Root0.427
SRR9715742Root1.337
SRR9715743Root1.164

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.843
SRR8749028MeJA induced 9h4.083
SRR8749029MeJA induced 9h2.659
SRR8749030Uninduced8.369
SRR8749031Uninduced6.283
SRR8749032Uninduced4.484

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root2.205
SRR8400027Control-Root2.816

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved