Gene detail information of Glyur000024s00006625.3


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G42070.19.00E-96nudix hydrolase homolog 23
NRXP_003533914.16.05E-141PREDICTED: nudix hydrolase 23, chloroplastic-like isoform X1 [Glycine max]
COGYP_314505.11.00E-55hypothetical protein Tbd_0747 [Thiobacillus denitrificans ATCC 25259]
Swissprottr|P93740|NUD23_ARATH1.00E-121Nudix hydrolase 23, chloroplastic (Precursor)
trEMBLtr|K7LD64|K7LD64_SOYBN2.00E-141Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G17010.4}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00024335438338703-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K18453NUDT23 EC:3.6.1.13 3.6.1.18 Purine metabolism map00230
Riboflavin metabolismmap00740


Gene Ontology

molecular_function

GO:0016787  hydrolase activity



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000024s00006625.3PF14803.1Nudix_N_228616.50E-15
Glyur000024s00006625.3PF00293.23NUDIX661703.40E-14


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.914
SRR1783600control1.813
SRR1783602moderate drought stress1.534
SRR1811619moderate drought stress1.470

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.679
DRR006520Root Summer glycyrrhizin high producing strain3.030
DRR006521Root Winter glycyrrhizin high producing strain0.986
DRR006522Root Winter glycyrrhizin high producing strain1.100
DRR006523Root Summer glycyrrhizin low producing strain2.737
DRR006524Root Summer glycyrrhizin low producing strain2.436
DRR006525Leaf Summer glycyrrhizin high producing strain6.621
DRR006526Leaf Summer glycyrrhizin high producing strain6.718

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)8.235
SRR2868004Drought Stress(Tissue:root)7.647
SRR2967015Control (Tissue:root)7.031

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.777
SRR9715740Leave5.000
SRR9715741Leave1.726
SRR9715739Root1.376
SRR9715742Root2.243
SRR9715743Root1.799

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.336
SRR8749028MeJA induced 9h0.241
SRR8749029MeJA induced 9h0.652
SRR8749030Uninduced0.694
SRR8749031Uninduced0.289
SRR8749032Uninduced0.828

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root9.999
SRR8400027Control-Root10.493

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved