Gene detail information of Glyur000024s00006643.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G06800.1 | 1.00E-58 | myb-like HTH transcriptional regulator family protein |
| NR | XP_006587215.1 | 0 | PREDICTED: protein PHR1-LIKE 1-like isoform X1 [Glycine max] |
| Swissprot | tr|Q8GUN5|PHL1_ARATH | 2.00E-49 | Protein PHR1-LIKE 1 |
| trEMBL | tr|K7LD83|K7LD83_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G17404.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00024 | 459041 | 461898 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | G2-like |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000024s00006643.1 | PF00249.26 | Myb_DNA-binding | 259 | 308 | 3.70E-14 |
| Glyur000024s00006643.1 | PF14379.1 | Myb_CC_LHEQLE | 337 | 387 | 8.40E-20 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.293 |
| SRR1783600 | control | 0.310 |
| SRR1783602 | moderate drought stress | 1.094 |
| SRR1811619 | moderate drought stress | 1.096 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.057 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.082 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.076 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.070 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.330 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.368 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.271 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.265 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 5.838 |
| SRR2868004 | Drought Stress(Tissue:root) | 7.671 |
| SRR2967015 | Control (Tissue:root) | 8.584 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 1.457 |
| SRR9715740 | Leave | 1.101 |
| SRR9715741 | Leave | 1.568 |
| SRR9715739 | Root | 0.269 |
| SRR9715742 | Root | 0.491 |
| SRR9715743 | Root | 1.198 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.096 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.042 |
| SRR8749030 | Uninduced | 0.044 |
| SRR8749031 | Uninduced | 0.146 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 1.515 |
| SRR8400027 | Control-Root | 1.638 |