Gene detail information of Glyur000025s00003282.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G21200.1 | 5.00E-131 | sequence-specific DNA binding transcription factors |
| NR | XP_003536428.1 | 0 | PREDICTED: uncharacterized protein LOC100812134 [Glycine max] |
| trEMBL | tr|I1LDG7|I1LDG7_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G36980.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00025 | 10812 | 12158 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | Trihelix |
| EAR motif-containing Proteins | Trihelix |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000025s00003282.1 | PF13837.1 | Myb_DNA-bind_4 | 118 | 243 | 5.50E-24 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 17.299 |
| SRR1783600 | control | 21.036 |
| SRR1783602 | moderate drought stress | 28.240 |
| SRR1811619 | moderate drought stress | 31.103 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 25.215 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 24.767 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 43.952 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 38.167 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 32.290 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 32.526 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 18.200 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 18.260 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 61.688 |
| SRR2868004 | Drought Stress(Tissue:root) | 61.603 |
| SRR2967015 | Control (Tissue:root) | 49.887 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 31.228 |
| SRR9715740 | Leave | 31.000 |
| SRR9715741 | Leave | 37.767 |
| SRR9715739 | Root | 10.294 |
| SRR9715742 | Root | 40.073 |
| SRR9715743 | Root | 37.585 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 37.107 |
| SRR8749028 | MeJA induced 9h | 32.359 |
| SRR8749029 | MeJA induced 9h | 26.347 |
| SRR8749030 | Uninduced | 34.051 |
| SRR8749031 | Uninduced | 42.759 |
| SRR8749032 | Uninduced | 25.057 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 49.653 |
| SRR8400027 | Control-Root | 59.534 |